myRT

myRT report for GCA_901669855.1_eco14E_assembly

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Seq: CABFJM010000743.1 (59975 bp)
Overview 1 RT 1: 54523-58464 bp Neighborhood of RT #1 [54523, 58464] RVT-Retrons Feature: gene Location: 54523-54762 bp Feature: gene Location: 55069-55245 bp Feature: gene Location: 55318-57090 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 55477-56095 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 55477-56095 bp Feature: gene Location: 57112-57279 bp Feature: gene Location: 57325-58464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: CABFJM010001198.1 (8552 bp)
Overview 1 RT 1: 614-3436 bp Neighborhood of RT #1 [614, 3441] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 614-2515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 881-1712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 881-1712 bp Feature: domain Description: Intron_maturas2 Location: 1826-2084 bp Feature: domain Description: Intron_maturas2 Location: 182 6-2 084 bp Feature: domain Description: HNHc Note: nucleases Location: 2258-2420 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 58-2 42 0 bp Feature: gene Location: 2710-3150 bp Feature: domain Description: PRK13732 Location: 2716-3148 bp Feature: domain Description: PRK13732 Location: 2 716-3148 bp Feature: gene Location: 3208-3441 bp Feature: domain Description: DUF905 Location: 3238-3436 bp Feature: domain Description: DUF905 Location: 32 38-3436 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)

Seq: CABFJM010001098.1 (11849 bp)
Overview 1 RT 1: 440-4684 bp Neighborhood of RT #1 [440, 4684] Macro_Appr_pase Caudo_TAP RVT-UG17 SLATT_5 Feature: gene Location: 440-1342 bp Feature: domain Description: Macro_Appr_pase Location: 458-971 bp Feature: domain Description: Macro_Appr_pase Location: 458-971 bp Feature: gene Location: 1351-1935 bp Feature: domain Description: Caudo_TAP Location: 1567-1924 bp Feature: domain Description: Caudo_TAP Location: 1567-1924 bp Feature: gene Location: 2048-3418 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2276-2882 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2276-2882 bp Feature: gene Location: 3396-4100 bp Feature: domain Description: SLATT_5 Location: 3558-4068 bp Feature: domain Description: SLATT_5 Location: 3 558-4068 bp Feature: gene Location: 4508-4684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Macro_Appr_pase (cd02900), Caudo_TAP (pfam02413), RVT-UG17, SLATT_5 (pfam18160)