myRT

myRT report for GCA_901669885.1_eco26E_assembly

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Seq: CABFIY010000229.1 (11849 bp)
Overview 1 RT 1: 440-4684 bp Neighborhood of RT #1 [440, 4684] Macro_Appr_pase Caudo_TAP RVT-UG17 SLATT_5 Feature: gene Location: 440-1342 bp Feature: domain Description: Macro_Appr_pase Location: 458-971 bp Feature: domain Description: Macro_Appr_pase Location: 458-971 bp Feature: gene Location: 1351-1935 bp Feature: domain Description: Caudo_TAP Location: 1567-1924 bp Feature: domain Description: Caudo_TAP Location: 1 567-1 924 bp Feature: gene Location: 2048-3418 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2276-2882 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 2276-2882 bp Feature: gene Location: 3396-4100 bp Feature: domain Description: SLATT_5 Location: 3558-4068 bp Feature: domain Description: SLATT_5 Location: 3558-4068 bp Feature: gene Location: 4508-4684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Macro_Appr_pase (cd02900), Caudo_TAP (pfam02413), RVT-UG17, SLATT_5 (pfam18160)

Seq: CABFIY010000253.1 (4139 bp)
Overview 1 RT 1: 149-3613 bp Neighborhood of RT #1 [149, 3613] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 149-2050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-12 47 bp Feature: domain Description: Intron_maturas2 Location: 1361-1619 bp Feature: domain Description: Intron_maturas2 Location: 1361-1619 bp Feature: domain Description: HNHc Note: nucleases Location: 1793-1955 bp Feature: domain Description: HNHc Note: nucleases Location: 1793-1955 bp Feature: gene Location: 2836-3285 bp Feature: gene Location: 3311-3613 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CABFIY010000177.1 (60745 bp)
Overview 1 RT 1: 55293-59234 bp Neighborhood of RT #1 [55293, 59234] RVT-Retrons Feature: gene Location: 55293-55532 bp Feature: gene Location: 55839-56015 bp Feature: gene Location: 56088-57860 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 56247-56865 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 56247-56865 bp Feature: gene Location: 57882-58049 bp Feature: gene Location: 58095-59234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons