myRT

myRT report for GCA_901669945.1_kpn0822_assembly

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Seq: CABFJE010000272.1 (34127 bp)
Overview 1 RT 1: 25828-29036 bp Neighborhood of RT #1 [25828, 29036] PRK10276 RVT-GII Feature: gene Location: 25828-26253 bp Feature: domain Description: PRK10276 Location: 25831-26239 bp Feature: domain Description: PRK1 0276 Location: 25831 -26239 bp Feature: gene Location: 26371-26604 bp Feature: gene Location: 26655-28190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27060-27798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27060-27798 bp Feature: gene Location: 28424-28654 bp Feature: gene Location: 28713-29036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: CABFJE010000222.1 (163241 bp)
Overview 1 RT 1: 113578-119684 bp Neighborhood of RT #1 [113578, 119686] PapC_N FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 113578-114249 bp Feature: domain Description: PapC_N Location: 113704-114139 bp Feature: domain Description: PapC_N Location: 113704-114139 bp Feature: gene Location: 114246-116159 bp Feature: domain Description: FimD Location: 114279-116121 bp Feature: domain Description: FimD Location: 1142 79-11612 1 bp Feature: gene Location: 116185-118263 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116593-117037 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116593-117037 bp Feature: gene Location: 118320-118760 bp Feature: domain Description: Integrase_1 Location: 118326-118542 bp Feature: domain Description: Integrase_1 Location: 11832 6-118542 bp Feature: gene Location: 119021-119686 bp Feature: domain Description: INT_P4_C Location: 119126-119684 bp Feature: domain Description: INT_P4_C Location: 11912 6-119684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PapC_N (pfam13954), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)