myRT

myRT report for GCA_902143325.1_GUB8_contigs

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Seq: CABFUT010000167.1 (6584 bp)
Overview 1 RT 1: 1-3081 bp Neighborhood of RT #1 [1, 3089] RVT_N RVT-GII AAA_21 AAA_21 C_GCAxxG_C_C Feature: gene Location: 1-606 bp Feature: domain Description: RVT_N Location: 97-343 bp Feature: domain Description: RVT_N Location: 97-343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 406-607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 406-607 bp Feature: gene Location: 1363-2178 bp Feature: domain Description: AAA_21 Location: 1459-1528 bp Feature: domain Description: AAA_21 Location: 1 459-1 528 bp Feature: domain Description: AAA_21 Location: 1756-2167 bp Feature: domain Description: AAA_21 Location: 1 756-21 67 bp Feature: gene Location: 2736-3089 bp Feature: domain Description: C_GCAxxG_C_C Location: 2772-3081 bp Feature: domain Description: C_GCAxxG_C_C Location: 2772-3081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, AAA_21 (pfam13304), C_GCAxxG_C_C (TIGR01909)

Seq: CABFUT010013557.1 (156 bp)
Overview 1 RT 1: 2-131 bp Neighborhood of RT #1 [2, 154] RVT-GII Feature: gene Location: 2-154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-131 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CABFUT010006026.1 (394 bp)
Overview 1 RT 1: 2-389 bp Neighborhood of RT #1 [2, 391] RVT-GII Feature: gene Location: 2-391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-3 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CABFUT010000735.1 (3492 bp)
Overview 1 RT 1: 510-3375 bp Neighborhood of RT #1 [510, 3491] HicB InsQ RVT-GII GIIM HNHc Feature: gene Location: 510-686 bp Feature: domain Description: HicB Location: 513-678 bp Feature: domain Description: HicB Location: 513-678 bp Feature: gene Location: 898-2544 bp Feature: domain Description: InsQ Location: 1477-2512 bp Feature: domain Description: InsQ Location: 14 77-2512 bp Feature: gene Location: 2541-3491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2544-2697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 254 4 -2697 bp Feature: domain Description: GIIM Note: maturase Location: 2802-3030 bp Feature: domain Description: GIIM Note: maturase Location: 2802-3030 bp Feature: domain Description: HNHc Note: nucleases Location: 3219-3375 bp Feature: domain Description: HNHc Note: nucleases Location: 3219-3375 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HicB (pfam05534), InsQ (COG0675), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: CABFUT010005741.1 (418 bp)
Overview 1 RT 1: 31-385 bp Neighborhood of RT #1 [31, 417] RVT-GII Feature: gene Location: 31-417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109-385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109-385 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CABFUT010008896.1 (247 bp)
Overview 1 RT 1: 1-211 bp Neighborhood of RT #1 [1, 246] RVT-GII Feature: gene Location: 1-246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82-211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82-211 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII