myRT

myRT report for GCA_902155885.1_18174_8_31

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Seq: CABFWY010000002.1 (198623 bp)
Overview 1 RT 1: 80175-83763 bp 2 RT 2: 182710-186004 bp Neighborhood of RT #1 [80175, 83828] Tra5 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [182710, 186018] RVT-GII PRK10276 Feature: gene Location: 80175-80864 bp Feature: domain Description: Tra5 Location: 80280-80706 bp Feature: domain Description: Tra5 Location: 80280-80706 bp Feature: gene Location: 81016-81201 bp Feature: gene Location: 81288-82811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81561-82293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 561 -82293 bp Feature: domain Description: GIIM Note: maturase Location: 82368-82566 bp Feature: domain Description: GIIM Note: maturase Location: 82368-82566 bp Feature: gene Location: 82765-83190 bp Feature: gene Location: 83403-83828 bp Feature: domain Description: PHA02517 Location: 83427-83763 bp Feature: domain Description: PHA0251 7 Location: 83427-83763 bp Feature: gene Location: 182710-182925 bp Feature: gene Location: 183192-183422 bp Feature: gene Location: 183656-185191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184061-184799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 84061 -1 84799 bp Feature: gene Location: 185242-185475 bp Feature: gene Location: 185593-186018 bp Feature: domain Description: PRK10276 Location: 185596-186004 bp Feature: domain Description: PRK1 0276 Location: 1 85596-1 86004 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CABFWY010000003.1 (69394 bp)
Overview 1 RT 1: 2986-6527 bp 2 RT 2: 17635-22660 bp Neighborhood of RT #1 [2986, 6527] InsE PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [17635, 22665] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 2986-3258 bp Feature: domain Description: InsE Location: 2995-3244 bp Feature: domain Description: InsE Location: 2 995-32 44 bp Feature: gene Location: 3314-3739 bp Feature: domain Description: PHA02517 Location: 3338-3674 bp Feature: domain Description: PHA02 517 Location: 3338-3674 bp Feature: gene Location: 4331-5854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4604-5336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4604-5336 bp Feature: domain Description: GIIM Note: maturase Location: 5411-5609 bp Feature: domain Description: GIIM Note: maturase Location: 5411-5609 bp Feature: gene Location: 6019-6177 bp Feature: domain Description: PHA02517 Location: 6022-6142 bp Feature: domain Description: PHA02 517 Location: 602 2 -6142 bp Feature: gene Location: 6396-6527 bp Feature: gene Location: 17635-18906 bp Feature: domain Description: umuC Location: 17638-18898 bp Feature: domain Description: umuC Location: 17638-18898 bp Feature: gene Location: 18906-19718 bp Feature: domain Description: PRK10276 Location: 19338-19701 bp Feature: domain Description: PRK102 76 Location: 19338-19701 bp Feature: gene Location: 19743-21230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20148-20838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0148-2 0838 bp Feature: gene Location: 21299-21568 bp Feature: gene Location: 21700-22665 bp Feature: domain Description: ArdC Location: 21826-22660 bp Feature: domain Description: ArdC Location: 2 182 6-2 2 660 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), ArdC (COG4227)

Seq: CABFWY010000001.1 (5339812 bp)
Overview 1 RT 1: 763101-769969 bp Neighborhood of RT #1 [763101, 769971] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 763101-763829 bp Feature: domain Description: FimC Location: 763149-763812 bp Feature: domain Description: FimC Location: 763 149-763 812 bp Feature: gene Location: 763861-766470 bp Feature: domain Description: FimD Location: 763918-766459 bp Feature: domain Description: FimD Location: 763 918-766459 bp Feature: gene Location: 766470-768548 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 766878-767322 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 766878-7673 22 bp Feature: gene Location: 768605-769045 bp Feature: domain Description: Integrase_1 Location: 768611-768827 bp Feature: domain Description: Integrase_1 Location: 768611-768827 bp Feature: gene Location: 769306-769971 bp Feature: domain Description: INT_P4_C Location: 769411-769969 bp Feature: domain Description: INT_P4_C Location: 769411-769969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)