myRT

myRT report for GCA_902156015.1_18489_5_79

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Seq: CABFXE010000001.1 (5373892 bp)
Overview 1 RT 1: 1202921-1205770 bp 2 RT 2: 1352438-1355388 bp 3 RT 3: 1790844-1797314 bp 4 RT 4: 2948011-2956816 bp 5 RT 5: 3164144-3167996 bp Neighborhood of RT #1 [1202921, 1206162] INT_P4_C RVT-GII Neighborhood of RT #2 [1352438, 1355388] RVT-GII Neighborhood of RT #3 [1790844, 1797328] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #4 [2948011, 2956824] PRK15110 PRK09951 RVT-UG11 umuC PRK10276 RVT-GII PinE Neighborhood of RT #5 [3164144, 3167996] umuC PRK10276 RVT-GII Feature: gene Location: 1202921-1203196 bp Feature: gene Location: 1203712-1204197 bp Feature: domain Description: INT_P4_C Location: 1203715-1204090 bp Feature: domain Description: INT_P4_C Location: 1 20371 5-1 204090 bp Feature: gene Location: 1204675-1206162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1205080-1205770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 205080-1 205770 bp Feature: gene Location: 1352438-1352719 bp Feature: gene Location: 1352809-1353147 bp Feature: gene Location: 1353244-1354728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1353646-1354336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 353646-1 354336 bp Feature: gene Location: 1354885-1355103 bp Feature: gene Location: 1355131-1355388 bp Feature: gene Location: 1790844-1792268 bp Feature: domain Description: SbcB Location: 1790850-1792266 bp Feature: domain Description: SbcB Location: 1 790850-1 792266 bp Feature: gene Location: 1792443-1793612 bp Feature: domain Description: dacD Location: 1792452-1793607 bp Feature: domain Description: dacD Location: 1 792452-1 793607 bp Feature: gene Location: 1794129-1795616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1794534-1795224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 794534-1 795224 bp Feature: gene Location: 1795698-1796171 bp Feature: domain Description: PRK10016 Location: 1795701-1796160 bp Feature: domain Description: PRK1 001 6 Location: 1 795701 -1 7961 60 bp Feature: gene Location: 1796255-1797328 bp Feature: domain Description: YccC Location: 1796276-1797314 bp Feature: domain Description: YccC Location: 1 796276-1 79731 4 bp Feature: gene Location: 2948011-2948976 bp Feature: domain Description: PRK15110 Location: 2948014-2948974 bp Feature: domain Description: PRK1 51 1 0 Location: 294801 4-2948974 bp Feature: gene Location: 2949181-2949849 bp Feature: domain Description: PRK09951 Location: 2949184-2949847 bp Feature: domain Description: PRK09951 Location: 29491 84-2949847 bp Feature: gene Location: 2950050-2950958 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2950323-2950779 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 2950323-2950779 bp Feature: gene Location: 2951631-2952896 bp Feature: domain Description: umuC Location: 2951634-2952894 bp Feature: domain Description: umuC Location: 2951 634-2952894 bp Feature: gene Location: 2952898-2953317 bp Feature: domain Description: PRK10276 Location: 2952901-2953312 bp Feature: domain Description: PRK1 0276 Location: 2952901 -295331 2 bp Feature: gene Location: 2953397-2954881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2953799-2954489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2953799-2954489 bp Feature: gene Location: 2954890-2955057 bp Feature: gene Location: 2956276-2956824 bp Feature: domain Description: PinE Location: 2956279-2956816 bp Feature: domain Description: PinE Location: 2956279-295681 6 bp Feature: gene Location: 3164144-3165409 bp Feature: domain Description: umuC Location: 3164147-3165407 bp Feature: domain Description: umuC Location: 31 641 47-31 65407 bp Feature: gene Location: 3165412-3165831 bp Feature: domain Description: PRK10276 Location: 3165415-3165826 bp Feature: domain Description: PRK1 0276 Location: 31 6541 5-31 65826 bp Feature: gene Location: 3165910-3167397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3166315-3167005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 6631 5-31 67005 bp Feature: gene Location: 3167551-3167847 bp Feature: gene Location: 3167850-3167996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-GII, SbcB (COG2925), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), PRK15110 (peptide ABC transporter permease SapB), PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609)
PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PinE (COG1961)