myRT

myRT report for GCA_902156055.1_19646_2_30

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Seq: CABFXO010000001.1 (5602868 bp)
Overview 1 RT 1: 11740-16762 bp 2 RT 2: 156592-160432 bp 3 RT 3: 606219-608919 bp 4 RT 4: 801197-806078 bp 5 RT 5: 1857151-1864004 bp 6 RT 6: 4740722-4744830 bp Neighborhood of RT #1 [11740, 16770] ArdC RVT-GII PRK10276 umuC Neighborhood of RT #2 [156592, 160452] INT_Cre_C RVT-GII HHA Neighborhood of RT #3 [606219, 608919] RVT-GII Neighborhood of RT #4 [801197, 806083] YccC PRK10016 RVT-GII dacD Neighborhood of RT #5 [1857151, 1864021] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Neighborhood of RT #6 [4740722, 4744832] DinI RVT-GII PRK10276 umuC Feature: gene Location: 11740-12705 bp Feature: domain Description: ArdC Location: 11866-12700 bp Feature: domain Description: ArdC Location: 1 1 866-1 2700 bp Feature: gene Location: 12837-13106 bp Feature: gene Location: 13175-14659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13577-14267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3577-1 4267 bp Feature: gene Location: 14816-15499 bp Feature: domain Description: PRK10276 Location: 15119-15482 bp Feature: domain Description: PRK1 0276 Location: 1 51 1 9-1 5482 bp Feature: gene Location: 15499-16770 bp Feature: domain Description: umuC Location: 15502-16762 bp Feature: domain Description: umuC Location: 1 5502-1 6762 bp Feature: gene Location: 156592-156909 bp Feature: gene Location: 156975-158111 bp Feature: domain Description: INT_Cre_C Location: 157398-158052 bp Feature: domain Description: INT_Cre_C Location: 1 57398-1 58052 bp Feature: gene Location: 158197-159681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 158599-159289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 58599-1 59289 bp Feature: gene Location: 159690-159857 bp Feature: gene Location: 160198-160452 bp Feature: domain Description: HHA Location: 160249-160432 bp Feature: domain Description: HHA Location: 1 60249-1 60432 bp Feature: gene Location: 606219-606485 bp Feature: gene Location: 606497-606736 bp Feature: gene Location: 606814-608298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 607216-607906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60721 6-607906 bp Feature: gene Location: 608307-608474 bp Feature: gene Location: 608704-608919 bp Feature: gene Location: 801197-802255 bp Feature: domain Description: YccC Location: 801203-802241 bp Feature: domain Description: YccC Location: 801 203-802241 bp Feature: gene Location: 802354-802827 bp Feature: domain Description: PRK10016 Location: 802357-802816 bp Feature: domain Description: PRK1 001 6 Location: 802357-80281 6 bp Feature: gene Location: 802909-804393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 803311-804001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80331 1 -804001 bp Feature: gene Location: 804402-804569 bp Feature: gene Location: 804914-806083 bp Feature: domain Description: dacD Location: 804923-806078 bp Feature: domain Description: dacD Location: 804923-806078 bp Feature: gene Location: 1857151-1857816 bp Feature: domain Description: INT_P4_C Location: 1857256-1857814 bp Feature: domain Description: INT_P4_C Location: 1 857256-1 85781 4 bp Feature: gene Location: 1858077-1858517 bp Feature: domain Description: Integrase_1 Location: 1858083-1858299 bp Feature: domain Description: Integrase_1 Location: 1 858083-1 858299 bp Feature: gene Location: 1858574-1860652 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1858982-1859426 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 858982-1 859426 bp Feature: gene Location: 1860652-1863261 bp Feature: domain Description: FimD Location: 1860709-1863250 bp Feature: domain Description: FimD Location: 1 860709-1 863250 bp Feature: gene Location: 1863293-1864021 bp Feature: domain Description: FimC Location: 1863341-1864004 bp Feature: domain Description: FimC Location: 1 863341 -1 864004 bp Feature: gene Location: 4740722-4740964 bp Feature: domain Description: DinI Location: 4740773-4740953 bp Feature: domain Description: DinI Location: 4740773-4740953 bp Feature: gene Location: 4740979-4741125 bp Feature: gene Location: 4741579-4743066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4741984-4742674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4741 984-4742674 bp Feature: gene Location: 4743145-4743564 bp Feature: domain Description: PRK10276 Location: 4743148-4743559 bp Feature: domain Description: PRK1 0276 Location: 47431 48-4743559 bp Feature: gene Location: 4743567-4744832 bp Feature: domain Description: umuC Location: 4743570-4744830 bp Feature: domain Description: umuC Location: 4743570-4744830 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), INT_Cre_C (cd00799), HHA (pfam05321), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), INT_P4_C (cd00801)
Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121), DinI (pfam06183)

Seq: CABFXO010000002.1 (102917 bp)
Overview 1 RT 1: 92544-95792 bp Neighborhood of RT #1 [92544, 95806] RVT-GII PRK10276 Feature: gene Location: 92544-92765 bp Feature: gene Location: 93027-93257 bp Feature: gene Location: 93491-94978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93896-94586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93896-94586 bp Feature: gene Location: 94984-95151 bp Feature: gene Location: 95381-95806 bp Feature: domain Description: PRK10276 Location: 95384-95792 bp Feature: domain Description: PRK102 76 Location: 95384-95792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)