myRT

myRT report for GCA_902156085.1_19646_2_74

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Seq: CABFYA010000002.1 (113498 bp)
Overview 1 RT 1: 97327-103779 bp Neighborhood of RT #1 [97327, 103779] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 97327-97632 bp Feature: gene Location: 98515-100791 bp Feature: domain Description: AAA_15 Location: 98548-99556 bp Feature: domain Description: AAA_1 5 Location: 98548-99556 bp Feature: gene Location: 100906-102006 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 101086-101620 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 01 086-1 01 620 bp Feature: gene Location: 102662-103498 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 103151-103322 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 1 031 51 -1 03322 bp Feature: gene Location: 103528-103779 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)

Seq: CABFYA010000003.1 (81737 bp)
Overview 1 RT 1: 2970-7341 bp 2 RT 2: 44582-49604 bp Neighborhood of RT #1 [2970, 7457] InsE PHA02517 RVT-GII GIIM PHA02517 COG3547 Neighborhood of RT #2 [44582, 49612] ArdC RVT-GII PRK10276 umuC Feature: gene Location: 2970-3272 bp Feature: domain Description: InsE Location: 2979-3261 bp Feature: domain Description: InsE Location: 2 979-32 61 bp Feature: gene Location: 3299-3724 bp Feature: domain Description: PHA02517 Location: 3323-3659 bp Feature: domain Description: PHA02 517 Location: 332 3-3659 bp Feature: gene Location: 4316-5839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4589-5321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4589-532 1 bp Feature: domain Description: GIIM Note: maturase Location: 5396-5594 bp Feature: domain Description: GIIM Note: maturase Location: 5396-5594 bp Feature: gene Location: 6004-6162 bp Feature: domain Description: PHA02517 Location: 6007-6127 bp Feature: domain Description: PHA02 517 Location: 6007-612 7 bp Feature: gene Location: 6381-7457 bp Feature: domain Description: COG3547 Location: 6420-7341 bp Feature: domain Description: COG3547 Location: 642 0-7341 bp Feature: gene Location: 44582-45547 bp Feature: domain Description: ArdC Location: 44708-45542 bp Feature: domain Description: ArdC Location: 44708-45542 bp Feature: gene Location: 45679-45948 bp Feature: gene Location: 46017-47504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46422-47112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4642 2 -47112 bp Feature: gene Location: 47529-48341 bp Feature: domain Description: PRK10276 Location: 47961-48324 bp Feature: domain Description: PRK102 76 Location: 47961-4832 4 bp Feature: gene Location: 48341-49612 bp Feature: domain Description: umuC Location: 48344-49604 bp Feature: domain Description: umuC Location: 48344-49604 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), ArdC (COG4227), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: CABFYA010000001.1 (5376581 bp)
Overview 1 RT 1: 4727989-4731063 bp Neighborhood of RT #1 [4727989, 4731068] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 4727989-4728207 bp Feature: domain Description: PRK09678 Location: 4727992-4728190 bp Feature: domain Description: PRK09678 Location: 4727992-4728190 bp Feature: gene Location: 4728454-4728642 bp Feature: gene Location: 4729085-4729384 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4729088-4729199 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4729088-4729199 bp Feature: gene Location: 4729999-4730481 bp Feature: domain Description: SmpB Location: 4730029-4730473 bp Feature: domain Description: SmpB Location: 473 0029-473 0473 bp Feature: gene Location: 4730631-4731068 bp Feature: domain Description: PRK10724 Location: 4730634-4731063 bp Feature: domain Description: PRK10724 Location: 473 063 4-473 1063 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)