myRT

myRT report for GCA_902156115.1_19084_3_118

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Seq: CABFXZ010000002.1 (133032 bp)
Overview 1 RT 1: 128740-131856 bp Neighborhood of RT #1 [128740, 131856] PRK10276 RVT-GII Feature: gene Location: 128740-129165 bp Feature: domain Description: PRK10276 Location: 128743-129151 bp Feature: domain Description: PRK1 0276 Location: 1 28743-1 291 51 bp Feature: gene Location: 129359-129571 bp Feature: gene Location: 129646-131055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 129973-130663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 29973-1 30663 bp Feature: gene Location: 131289-131519 bp Feature: gene Location: 131578-131856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: CABFXZ010000001.1 (5409838 bp)
Overview 1 RT 1: 778061-784929 bp 2 RT 2: 1300722-1304230 bp 3 RT 3: 1541491-1544685 bp 4 RT 4: 1846027-1852498 bp 5 RT 5: 2028770-2032840 bp 6 RT 6: 3271401-3275254 bp Neighborhood of RT #1 [778061, 784931] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Neighborhood of RT #2 [1300722, 1304427] DUF551 RVT-GII PRK10276 Neighborhood of RT #3 [1541491, 1544888] RVT-GII PRK10276 Neighborhood of RT #4 [1846027, 1852512] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #5 [2028770, 2033034] RVT-GII PRK10276 Neighborhood of RT #6 [3271401, 3275254] umuC PRK10276 RVT-GII Feature: gene Location: 778061-778789 bp Feature: domain Description: FimC Location: 778109-778772 bp Feature: domain Description: FimC Location: 778109-778772 bp Feature: gene Location: 778821-781430 bp Feature: domain Description: FimD Location: 778878-781419 bp Feature: domain Description: FimD Location: 778878-781419 bp Feature: gene Location: 781430-783508 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 781838-782282 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 781838-782 2 82 bp Feature: gene Location: 783565-784005 bp Feature: domain Description: Integrase_1 Location: 783571-783787 bp Feature: domain Description: Integrase_1 Location: 783571-783787 bp Feature: gene Location: 784266-784931 bp Feature: domain Description: INT_P4_C Location: 784371-784929 bp Feature: domain Description: INT_P4_C Location: 784371-78492 9 bp Feature: gene Location: 1300722-1301198 bp Feature: domain Description: DUF551 Location: 1300983-1301181 bp Feature: domain Description: DUF551 Location: 1300983-1301181 bp Feature: gene Location: 1301357-1301584 bp Feature: gene Location: 1302304-1303791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1302709-1303399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1302 709-1303399 bp Feature: gene Location: 1303866-1304105 bp Feature: gene Location: 1304062-1304427 bp Feature: domain Description: PRK10276 Location: 1304107-1304230 bp Feature: domain Description: PRK102 76 Location: 1304107-13042 30 bp Feature: gene Location: 1541491-1541622 bp Feature: gene Location: 1542141-1542356 bp Feature: gene Location: 1542759-1544246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1543164-1543854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1543164-1543854 bp Feature: gene Location: 1544321-1544560 bp Feature: gene Location: 1544517-1544888 bp Feature: domain Description: PRK10276 Location: 1544562-1544685 bp Feature: domain Description: PRK102 76 Location: 1544562 -1544685 bp Feature: gene Location: 1846027-1847451 bp Feature: domain Description: SbcB Location: 1846033-1847449 bp Feature: domain Description: SbcB Location: 1846033-1847449 bp Feature: gene Location: 1847626-1848795 bp Feature: domain Description: dacD Location: 1847635-1848790 bp Feature: domain Description: dacD Location: 1847635-1848790 bp Feature: gene Location: 1849313-1850800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1849718-1850408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1849718-1850408 bp Feature: gene Location: 1850882-1851355 bp Feature: domain Description: PRK10016 Location: 1850885-1851344 bp Feature: domain Description: PRK10016 Location: 1850885-1851344 bp Feature: gene Location: 1851439-1852512 bp Feature: domain Description: YccC Location: 1851460-1852498 bp Feature: domain Description: YccC Location: 1851460-1852 498 bp Feature: gene Location: 2028770-2029504 bp Feature: gene Location: 2030295-2030510 bp Feature: gene Location: 2030913-2032400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2031318-2032008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 031318-2 032 008 bp Feature: gene Location: 2032478-2032717 bp Feature: gene Location: 2032717-2033034 bp Feature: domain Description: PRK10276 Location: 2032723-2032840 bp Feature: domain Description: PRK102 76 Location: 2 032 72 3-2 032 840 bp Feature: gene Location: 3271401-3272666 bp Feature: domain Description: umuC Location: 3271404-3272664 bp Feature: domain Description: umuC Location: 32 71404-32 72 664 bp Feature: gene Location: 3272669-3273088 bp Feature: domain Description: PRK10276 Location: 3272672-3273083 bp Feature: domain Description: PRK102 76 Location: 32 72 672 -32 73083 bp Feature: gene Location: 3273167-3274651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3273569-3274259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 73569-32 742 59 bp Feature: gene Location: 3274660-3274827 bp Feature: gene Location: 3275108-3275254 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801), DUF551 (pfam04448), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), SbcB (COG2925), dacD (PRK11397)
PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609)

Seq: CABFXZ010000003.1 (68429 bp)
Overview 1 RT 1: 52665-57690 bp Neighborhood of RT #1 [52665, 57695] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 52665-53936 bp Feature: domain Description: umuC Location: 52668-53928 bp Feature: domain Description: umuC Location: 52668-53 928 bp Feature: gene Location: 53936-54748 bp Feature: domain Description: PRK10276 Location: 54368-54731 bp Feature: domain Description: PRK10276 Location: 543 68-5473 1 bp Feature: gene Location: 54773-56260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55178-55868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55178-55868 bp Feature: gene Location: 56329-56598 bp Feature: gene Location: 56730-57695 bp Feature: domain Description: ArdC Location: 56856-57690 bp Feature: domain Description: ArdC Location: 56856-57690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)