myRT

myRT report for GCA_902156205.1_19646_2_24

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Seq: CABFXI010000003.1 (139161 bp)
Overview 1 RT 1: 108976-112816 bp Neighborhood of RT #1 [108976, 112836] INT_Cre_C RVT-GII HHA Feature: gene Location: 108976-109293 bp Feature: gene Location: 109359-110495 bp Feature: domain Description: INT_Cre_C Location: 109782-110436 bp Feature: domain Description: INT_Cre_C Location: 1 09782-1 1 0436 bp Feature: gene Location: 110581-112068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110986-111676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 0986-1 1 1 676 bp Feature: gene Location: 112093-112563 bp Feature: gene Location: 112582-112836 bp Feature: domain Description: HHA Location: 112633-112816 bp Feature: domain Description: HHA Location: 1 1 2633-1 1 281 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII, HHA (pfam05321)

Seq: CABFXI010000001.1 (3881460 bp)
Overview 1 RT 1: 567985-574456 bp 2 RT 2: 765223-769293 bp 3 RT 3: 2006213-2010066 bp Neighborhood of RT #1 [567985, 574470] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [765223, 769487] RVT-GII PRK10276 Neighborhood of RT #3 [2006213, 2010066] umuC PRK10276 RVT-GII Feature: gene Location: 567985-569409 bp Feature: domain Description: SbcB Location: 567991-569407 bp Feature: domain Description: SbcB Location: 567991-569407 bp Feature: gene Location: 569584-570753 bp Feature: domain Description: dacD Location: 569593-570748 bp Feature: domain Description: dacD Location: 569593-570748 bp Feature: gene Location: 571271-572758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 571676-572366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 571676-572 366 bp Feature: gene Location: 572840-573313 bp Feature: domain Description: PRK10016 Location: 572843-573302 bp Feature: domain Description: PRK10016 Location: 572 843-573302 bp Feature: gene Location: 573397-574470 bp Feature: domain Description: YccC Location: 573418-574456 bp Feature: domain Description: YccC Location: 573418-574456 bp Feature: gene Location: 765223-765957 bp Feature: gene Location: 766748-766963 bp Feature: gene Location: 767366-768853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 767771-768461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 767771-768461 bp Feature: gene Location: 768931-769170 bp Feature: gene Location: 769170-769487 bp Feature: domain Description: PRK10276 Location: 769176-769293 bp Feature: domain Description: PRK102 76 Location: 769176-7692 93 bp Feature: gene Location: 2006213-2007478 bp Feature: domain Description: umuC Location: 2006216-2007476 bp Feature: domain Description: umuC Location: 2 0062 16-2 007476 bp Feature: gene Location: 2007481-2007900 bp Feature: domain Description: PRK10276 Location: 2007484-2007895 bp Feature: domain Description: PRK102 76 Location: 2 007484-2 007895 bp Feature: gene Location: 2007979-2009463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2008381-2009071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 008381-2 009071 bp Feature: gene Location: 2009472-2009639 bp Feature: gene Location: 2009920-2010066 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: CABFXI010000005.1 (102917 bp)
Overview 1 RT 1: 92544-95792 bp Neighborhood of RT #1 [92544, 95806] RVT-GII PRK10276 Feature: gene Location: 92544-92765 bp Feature: gene Location: 93027-93257 bp Feature: gene Location: 93491-94978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93896-94586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 896-94586 bp Feature: gene Location: 94984-95151 bp Feature: gene Location: 95381-95806 bp Feature: domain Description: PRK10276 Location: 95384-95792 bp Feature: domain Description: PRK10276 Location: 953 84-95792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CABFXI010000002.1 (1484136 bp)
Overview 1 RT 1: 477340-484193 bp Neighborhood of RT #1 [477340, 484210] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 477340-478005 bp Feature: domain Description: INT_P4_C Location: 477445-478003 bp Feature: domain Description: INT_P4 _C Location: 4 774 4 5-4 78003 bp Feature: gene Location: 478266-478706 bp Feature: domain Description: Integrase_1 Location: 478272-478488 bp Feature: domain Description: Integrase_1 Location: 4 78272-4 784 88 bp Feature: gene Location: 478763-480841 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 479171-479615 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4 79171-4 79615 bp Feature: gene Location: 480841-483450 bp Feature: domain Description: FimD Location: 480898-483439 bp Feature: domain Description: FimD Location: 4 80898-4 834 39 bp Feature: gene Location: 483482-484210 bp Feature: domain Description: FimC Location: 483530-484193 bp Feature: domain Description: FimC Location: 4 83530-4 84 193 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: CABFXI010000006.1 (12801 bp)
Overview 1 RT 1: 1-3842 bp Neighborhood of RT #1 [1, 3850] RVT-GII PRK10276 umuC Feature: gene Location: 1-186 bp Feature: gene Location: 255-1742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 660-1350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 660-135 0 bp Feature: gene Location: 1767-2579 bp Feature: domain Description: PRK10276 Location: 2199-2562 bp Feature: domain Description: PRK10276 Location: 2199-25 62 bp Feature: gene Location: 2579-3850 bp Feature: domain Description: umuC Location: 2582-3842 bp Feature: domain Description: umuC Location: 25 82-3842 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)