myRT

myRT report for GCA_902156555.1_18489_5_81

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Seq: CABFZH010000001.1 (3664321 bp)
Overview 1 RT 1: 344963-347812 bp 2 RT 2: 494480-497430 bp 3 RT 3: 932886-939356 bp 4 RT 4: 2114522-2123327 bp 5 RT 5: 2330655-2334507 bp Neighborhood of RT #1 [344963, 348204] INT_P4_C RVT-GII Neighborhood of RT #2 [494480, 497430] RVT-GII Neighborhood of RT #3 [932886, 939370] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #4 [2114522, 2123335] PRK15110 PRK09951 RVT-UG11 umuC PRK10276 RVT-GII PinE Neighborhood of RT #5 [2330655, 2334507] umuC PRK10276 RVT-GII Feature: gene Location: 344963-345238 bp Feature: gene Location: 345754-346239 bp Feature: domain Description: INT_P4_C Location: 345757-346132 bp Feature: domain Description: INT_P4_C Location: 345757-3461 32 bp Feature: gene Location: 346717-348204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347122-347812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3471 22-34781 2 bp Feature: gene Location: 494480-494761 bp Feature: gene Location: 494851-495189 bp Feature: gene Location: 495286-496770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 495688-496378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 495688-496378 bp Feature: gene Location: 496927-497145 bp Feature: gene Location: 497173-497430 bp Feature: gene Location: 932886-934310 bp Feature: domain Description: SbcB Location: 932892-934308 bp Feature: domain Description: SbcB Location: 932892-934308 bp Feature: gene Location: 934485-935654 bp Feature: domain Description: dacD Location: 934494-935649 bp Feature: domain Description: dacD Location: 934494-935649 bp Feature: gene Location: 936171-937658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 936576-937266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 936576-937266 bp Feature: gene Location: 937740-938213 bp Feature: domain Description: PRK10016 Location: 937743-938202 bp Feature: domain Description: PRK1 001 6 Location: 937743-938202 bp Feature: gene Location: 938297-939370 bp Feature: domain Description: YccC Location: 938318-939356 bp Feature: domain Description: YccC Location: 93831 8-939356 bp Feature: gene Location: 2114522-2115487 bp Feature: domain Description: PRK15110 Location: 2114525-2115485 bp Feature: domain Description: PRK1 51 1 0 Location: 21 1 4525-21 1 5485 bp Feature: gene Location: 2115692-2116360 bp Feature: domain Description: PRK09951 Location: 2115695-2116358 bp Feature: domain Description: PRK09951 Location: 21 1 5695-21 1 6358 bp Feature: gene Location: 2116561-2117469 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2116834-2117290 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 21 1 6834-21 1 7290 bp Feature: gene Location: 2118142-2119407 bp Feature: domain Description: umuC Location: 2118145-2119405 bp Feature: domain Description: umuC Location: 21 1 81 45-21 1 9405 bp Feature: gene Location: 2119409-2119828 bp Feature: domain Description: PRK10276 Location: 2119412-2119823 bp Feature: domain Description: PRK1 0276 Location: 21 1 941 2-21 1 9823 bp Feature: gene Location: 2119908-2121392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2120310-2121000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 2031 0-21 21 000 bp Feature: gene Location: 2121401-2121568 bp Feature: gene Location: 2122787-2123335 bp Feature: domain Description: PinE Location: 2122790-2123327 bp Feature: domain Description: PinE Location: 21 22790-21 23327 bp Feature: gene Location: 2330655-2331920 bp Feature: domain Description: umuC Location: 2330658-2331918 bp Feature: domain Description: umuC Location: 2330658-2331 91 8 bp Feature: gene Location: 2331923-2332342 bp Feature: domain Description: PRK10276 Location: 2331926-2332337 bp Feature: domain Description: PRK1 0276 Location: 2331 926-2332337 bp Feature: gene Location: 2332421-2333908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2332826-2333516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2332826-233351 6 bp Feature: gene Location: 2334062-2334358 bp Feature: gene Location: 2334361-2334507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-GII, SbcB (COG2925), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), PRK15110 (peptide ABC transporter permease SapB), PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609)
PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PinE (COG1961)