myRT

myRT report for GCA_902157185.1_18174_4_23

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Seq: CABGBS010000002.1 (200946 bp)
Overview 1 RT 1: 109657-113517 bp Neighborhood of RT #1 [109657, 113517] HHA RVT-GII INT_Cre_C Feature: gene Location: 109657-109911 bp Feature: domain Description: HHA Location: 109708-109891 bp Feature: domain Description: HHA Location: 1 09708-1 09891 bp Feature: gene Location: 109930-110400 bp Feature: gene Location: 110425-111912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110830-111520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 0830-1 1 1 520 bp Feature: gene Location: 111998-113134 bp Feature: domain Description: INT_Cre_C Location: 112421-113075 bp Feature: domain Description: INT_Cre_C Location: 1 1 2421 -1 1 3075 bp Feature: gene Location: 113200-113517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)

Seq: CABGBS010000001.1 (5346416 bp)
Overview 1 RT 1: 169122-173775 bp 2 RT 2: 4221171-4225279 bp 3 RT 3: 4389669-4400337 bp Neighborhood of RT #1 [169122, 173775] PRK10276 RVT-GII Neighborhood of RT #2 [4221171, 4225281] DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [4389669, 4400339] SGNH_hydrolase_like_2 PinE RVT-GII PRK10276 umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 169122-169493 bp Feature: domain Description: PRK10276 Location: 169167-169329 bp Feature: domain Description: PRK102 76 Location: 169167-16932 9 bp Feature: gene Location: 169450-169689 bp Feature: gene Location: 169766-171250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 170168-170858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 170168-170858 bp Feature: gene Location: 171259-171426 bp Feature: gene Location: 173032-173775 bp Feature: gene Location: 4221171-4221413 bp Feature: domain Description: DinI Location: 4221222-4221402 bp Feature: domain Description: DinI Location: 42 2 12 2 2 -42 2 1402 bp Feature: gene Location: 4221428-4221574 bp Feature: gene Location: 4222028-4223515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4222433-4223123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 2 2 433-42 2 312 3 bp Feature: gene Location: 4223594-4224013 bp Feature: domain Description: PRK10276 Location: 4223597-4224008 bp Feature: domain Description: PRK102 76 Location: 42 2 3597-42 2 4008 bp Feature: gene Location: 4224016-4225281 bp Feature: domain Description: umuC Location: 4224019-4225279 bp Feature: domain Description: umuC Location: 42 2 4019-42 2 52 79 bp Feature: gene Location: 4389669-4391432 bp Feature: domain Description: SGNH_hydrolase_like_2 Location: 4391004-4391415 bp Feature: domain Description: SGNH_hydrolase_like_2 Location: 4391004-4391415 bp Feature: gene Location: 4391525-4392073 bp Feature: domain Description: PinE Location: 4391528-4392065 bp Feature: domain Description: PinE Location: 439152 8-4392 065 bp Feature: gene Location: 4393466-4394953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4393871-4394561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4393871-4394561 bp Feature: gene Location: 4395033-4395452 bp Feature: domain Description: PRK10276 Location: 4395036-4395447 bp Feature: domain Description: PRK102 76 Location: 4395036-4395447 bp Feature: gene Location: 4395454-4396719 bp Feature: domain Description: umuC Location: 4395457-4396717 bp Feature: domain Description: umuC Location: 4395457-4396717 bp Feature: gene Location: 4396944-4397132 bp Feature: gene Location: 4397392-4398300 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4397665-4398121 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4397665-439812 1 bp Feature: gene Location: 4398501-4399169 bp Feature: domain Description: PRK09951 Location: 4398504-4399167 bp Feature: domain Description: PRK09951 Location: 4398504-4399167 bp Feature: gene Location: 4399374-4400339 bp Feature: domain Description: PRK15110 Location: 4399377-4400337 bp Feature: domain Description: PRK15110 Location: 4399377-4400337 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DinI (pfam06183), umuC (PRK03609), SGNH_hydrolase_like_2 (cd01834), PinE (COG1961), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)