myRT

myRT report for GCA_902157265.1_18174_8_146

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Seq: CABGBR010000003.1 (867075 bp)
Overview 1 RT 1: 92987-95892 bp 2 RT 2: 535911-539362 bp Neighborhood of RT #1 [92987, 95942] RVT-GII int Neighborhood of RT #2 [535911, 539418] PRK10276 PRK10276 RVT-GII RVT-GII Laminin_G_3 Feature: gene Location: 92987-94471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93389-94079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93389-94079 bp Feature: gene Location: 94480-94647 bp Feature: gene Location: 94890-95942 bp Feature: domain Description: int Location: 94893-95892 bp Feature: domain Description: int Location: 94893-95892 bp Feature: gene Location: 535911-536228 bp Feature: domain Description: PRK10276 Location: 535917-536031 bp Feature: domain Description: PRK1 0276 Location: 53591 7-536031 bp Feature: domain Description: PRK10276 Location: 536058-536127 bp Feature: domain Description: PRK1 0276 Location: 536058-5361 27 bp Feature: gene Location: 536276-536455 bp Feature: gene Location: 536545-537150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 536548-536758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 536548-536758 bp Feature: gene Location: 537221-537406 bp Feature: gene Location: 537432-538028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 537834-537996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 537834-537996 bp Feature: gene Location: 538037-538204 bp Feature: gene Location: 538687-539418 bp Feature: domain Description: Laminin_G_3 Location: 539008-539362 bp Feature: domain Description: Laminin_G_3 Location: 539008-539362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, int (PHA02601), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), Laminin_G_3 (pfam13385)

Seq: CABGBR010000041.1 (1797 bp)
Overview 1 RT 1: 1-1796 bp Neighborhood of RT #1 [1, 1796] RVT-GII Feature: gene Location: 1-1338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 256-946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 56-946 bp Feature: gene Location: 1485-1796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CABGBR010000001.1 (3317000 bp)
Overview 1 RT 1: 2874234-2878342 bp 2 RT 2: 3013953-3018228 bp 3 RT 3: 3097669-3100674 bp Neighborhood of RT #1 [2874234, 2878344] DinI RVT-GII PRK10276 umuC Neighborhood of RT #2 [3013953, 3018233] Rve RVT-GII PRK10276 Neighborhood of RT #3 [3097669, 3100697] MazE PRK09812 RVT-GII PRK10276 Feature: gene Location: 2874234-2874476 bp Feature: domain Description: DinI Location: 2874285-2874465 bp Feature: domain Description: DinI Location: 2874285-2874465 bp Feature: gene Location: 2874491-2874637 bp Feature: gene Location: 2875091-2876578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2875496-2876186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2875496-2876186 bp Feature: gene Location: 2876657-2877076 bp Feature: domain Description: PRK10276 Location: 2876660-2877071 bp Feature: domain Description: PRK10276 Location: 2876660-2877071 bp Feature: gene Location: 2877079-2878344 bp Feature: domain Description: umuC Location: 2877082-2878342 bp Feature: domain Description: umuC Location: 2877082-28783 42 bp Feature: gene Location: 3013953-3014669 bp Feature: domain Description: Rve Location: 3013968-3014613 bp Feature: domain Description: Rve Location: 3 013 968-3 014613 bp Feature: gene Location: 3016040-3016252 bp Feature: gene Location: 3016464-3016892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3016653-3016836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 016653 -3 01683 6 bp Feature: gene Location: 3017039-3017455 bp Feature: gene Location: 3017610-3018233 bp Feature: domain Description: PRK10276 Location: 3017817-3018228 bp Feature: domain Description: PRK10276 Location: 3 017817-3 018228 bp Feature: gene Location: 3097669-3097926 bp Feature: domain Description: MazE Location: 3097678-3097918 bp Feature: domain Description: MazE Location: 3 097678-3 097918 bp Feature: gene Location: 3097928-3098260 bp Feature: domain Description: PRK09812 Location: 3097934-3098255 bp Feature: domain Description: PRK09812 Location: 3 09793 4-3 098255 bp Feature: gene Location: 3098377-3099861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3098779-3099469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 098779-3 099469 bp Feature: gene Location: 3099870-3100037 bp Feature: gene Location: 3100263-3100697 bp Feature: domain Description: PRK10276 Location: 3100311-3100674 bp Feature: domain Description: PRK10276 Location: 3 1003 11-3 100674 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Rve (COG3316), MazE (COG2336), PRK09812 (type II toxin-antitoxin system ChpB family toxin)