myRT

myRT report for GCA_902158565.1_SB6419

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Seq: CABGGU010000117.1 (34622 bp)
Overview 1 RT 1: 1-3740 bp Neighborhood of RT #1 [1, 3748] RVT-GII GIIM PHA02517 FimD Feature: gene Location: 1-243 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1 662 bp Feature: domain Description: GIIM Note: maturase Location: 1740-1959 bp Feature: domain Description: GIIM Note: maturase Location: 1 740-1 959 bp Feature: gene Location: 2309-2749 bp Feature: domain Description: PHA02517 Location: 2312-2720 bp Feature: domain Description: PHA0251 7 Location: 231 2-2720 bp Feature: gene Location: 2753-3748 bp Feature: domain Description: FimD Location: 2762-3740 bp Feature: domain Description: FimD Location: 2762-3740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABGGU010000108.1 (43491 bp)
Overview 1 RT 1: 77-2701 bp Neighborhood of RT #1 [77, 2706] RVT-GII GIIM rph Feature: gene Location: 77-1465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 407-1025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 407-102 5 bp Feature: domain Description: GIIM Note: maturase Location: 1073-1301 bp Feature: domain Description: GIIM Note: maturase Location: 1073-1301 bp Feature: gene Location: 1496-1693 bp Feature: gene Location: 1954-2706 bp Feature: domain Description: rph Location: 1993-2701 bp Feature: domain Description: rph Location: 1993-2 701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABGGU010000001.1 (376900 bp)
Overview 1 RT 1: 192549-195941 bp Neighborhood of RT #1 [192549, 195941] DUF4156 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 192549-192902 bp Feature: domain Description: DUF4156 Location: 192618-192894 bp Feature: domain Description: DUF4156 Location: 192618-192894 bp Feature: gene Location: 193161-193361 bp Feature: gene Location: 193399-195084 bp Feature: domain Description: RVT_N Location: 193450-193693 bp Feature: domain Description: RVT_N Location: 193 450-193 693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193738-194383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193 73 8-1943 83 bp Feature: domain Description: GIIM Note: maturase Location: 194437-194668 bp Feature: domain Description: GIIM Note: maturase Location: 19443 7-194668 bp Feature: domain Description: HNHc Note: nucleases Location: 194881-195040 bp Feature: domain Description: HNHc Note: nucleases Location: 194881-195040 bp Feature: gene Location: 195196-195450 bp Feature: gene Location: 195690-195941 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABGGU010000142.1 (16792 bp)
Overview 1 RT 1: 138-4105 bp Neighborhood of RT #1 [138, 4122] RVT-GII Intron_maturas2 HNHc MPTase-PolyVal ICE_TraI_Pfluor TraI_2_C Feature: gene Location: 138-452 bp Feature: gene Location: 570-2429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 837-1668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 837-1668 bp Feature: domain Description: Intron_maturas2 Location: 1758-2040 bp Feature: domain Description: Intron_maturas2 Location: 1758-204 0 bp Feature: domain Description: HNHc Note: nucleases Location: 2184-2361 bp Feature: domain Description: HNHc Note: nucleases Location: 2184 -2361 bp Feature: gene Location: 2555-2698 bp Feature: domain Description: MPTase-PolyVal Location: 2561-2636 bp Feature: domain Description: MPTase-PolyVal Location: 2561-2636 bp Feature: gene Location: 2833-4122 bp Feature: domain Description: ICE_TraI_Pfluor Location: 2917-3547 bp Feature: domain Description: ICE_TraI_Pfluor Location: 2917-354 7 bp Feature: domain Description: TraI_2_C Location: 3751-4105 bp Feature: domain Description: TraI_2_C Location: 3751-4 105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT