myRT

myRT report for GCA_902158605.1_SB6422

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Seq: CABGGW010000028.1 (3309 bp)
Overview 1 RT 1: 1-3225 bp Neighborhood of RT #1 [1, 3225] FimD FimA RVT-UG4 Feature: gene Location: 1-1071 bp Feature: domain Description: FimD Location: 4-1060 bp Feature: domain Description: FimD Location: 4-1 060 bp Feature: gene Location: 1144-1716 bp Feature: domain Description: FimA Location: 1165-1714 bp Feature: domain Description: FimA Location: 1 1 65-1 71 4 bp Feature: gene Location: 1742-2701 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2069-2522 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2069-2522 bp Feature: gene Location: 2701-3225 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimD (COG3188), FimA (pfam16970), RVT-UG4

Seq: CABGGW010000005.1 (181572 bp)
Overview 1 RT 1: 134929-142579 bp Neighborhood of RT #1 [134929, 142602] RuMP_HxlA NT_KNTase_like RVT-UG1 MviM Feature: gene Location: 134929-135564 bp Feature: domain Description: RuMP_HxlA Location: 134935-135547 bp Feature: domain Description: RuMP_HxlA Location: 134935-135547 bp Feature: gene Location: 135745-136545 bp Feature: domain Description: NT_KNTase_like Location: 135775-135934 bp Feature: domain Description: NT_KNTase_like Location: 135775-135934 bp Feature: gene Location: 137147-140848 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 137759-138218 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 137759-1382 18 bp Feature: gene Location: 140857-141291 bp Feature: gene Location: 141580-142602 bp Feature: domain Description: MviM Location: 141583-142579 bp Feature: domain Description: MviM Location: 141583-142 579 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RuMP_HxlA (TIGR03128), NT_KNTase_like (cd05403), RVT-UG1, MviM (COG0673)

Seq: CABGGW010000016.1 (46609 bp)
Overview 1 RT 1: 32121-35261 bp Neighborhood of RT #1 [32121, 35749] RVT-Retrons HNH_2 Feature: gene Location: 32121-32357 bp Feature: gene Location: 32622-32822 bp Feature: gene Location: 32853-34034 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33003-33579 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 3 003 -3 3 579 bp Feature: gene Location: 34024-34686 bp Feature: gene Location: 34991-35749 bp Feature: domain Description: HNH_2 Location: 35117-35261 bp Feature: domain Description: HNH_2 Location: 3 5117-3 5261 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HNH_2 (pfam13391)