myRT

myRT report for GCA_902160055.1_25426_7_140

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Seq: CABGMI010000008.1 (228717 bp)
Overview 1 RT 1: 210817-221770 bp Neighborhood of RT #1 [210817, 221868] DjlA Arm-DNA-bind_3 INT_P4_C RVT-UG1 RT_Bac_retron_II HsdM RMtype1_S_EcoEI-TRD1-CR1_like RMtype1_S_EcoEI-TRD1-CR1_like Feature: gene Location: 210817-211986 bp Feature: domain Description: DjlA Location: 211474-211951 bp Feature: domain Description: DjlA Location: 21 1 474-21 1 951 bp Feature: gene Location: 212548-213855 bp Feature: domain Description: Arm-DNA-bind_3 Location: 212563-212830 bp Feature: domain Description: Arm-DNA-bind_3 Location: 21 2563-21 2830 bp Feature: domain Description: INT_P4_C Location: 213247-213796 bp Feature: domain Description: INT_P4_C Location: 21 3247-21 3796 bp Feature: gene Location: 214148-217924 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 214766-215273 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 21 4766-21 5273 bp Feature: domain Description: RT_Bac_retron_II Location: 217079-217235 bp Feature: domain Description: RT_Bac_retron_II Location: 21 7079-21 7235 bp Feature: gene Location: 218132-220492 bp Feature: domain Description: HsdM Location: 218156-219560 bp Feature: domain Description: HsdM Location: 21 81 56-21 9560 bp Feature: gene Location: 220633-221868 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 220648-221128 bp Feature: domain Description: RMtype1 _S_EcoEI-TRD1 -CR1 _like Location: 220648-221 1 28 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 221626-221770 bp Feature: domain Description: RMtype1 _S_EcoEI-TRD1 -CR1 _like Location: 221 626-221 770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DjlA (COG1076), Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), RVT-UG1, RT_Bac_retron_II (cd03487), HsdM (COG0286), RMtype1_S_EcoEI-TRD1-CR1_like (cd17260)

Seq: CABGMI010000028.1 (43212 bp)
Overview 1 RT 1: 4601-8983 bp Neighborhood of RT #1 [4601, 8991] RVT-Retrons PRK09692 Feature: gene Location: 4601-4849 bp Feature: gene Location: 5176-5361 bp Feature: gene Location: 5667-6851 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5817-6396 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5817-6396 bp Feature: gene Location: 6851-7891 bp Feature: gene Location: 7894-8991 bp Feature: domain Description: PRK09692 Location: 7900-8983 bp Feature: domain Description: PRK09692 Location: 7900-8983 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK09692 (Integrase; provisional)