myRT

myRT report for GCA_902160065.1_25426_7_141

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Seq: CABGMO010000028.1 (43207 bp)
Overview 1 RT 1: 34191-40358 bp Neighborhood of RT #1 [34191, 40378] PRK09692 RVT-Retrons COG3515 VasL Feature: gene Location: 34191-35300 bp Feature: domain Description: PRK09692 Location: 34200-35292 bp Feature: domain Description: PRK09692 Location: 34200-35292 bp Feature: gene Location: 35303-36343 bp Feature: gene Location: 36343-37527 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36493-37072 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36493-37072 bp Feature: gene Location: 37833-38018 bp Feature: gene Location: 39059-40378 bp Feature: domain Description: COG3515 Location: 39071-39599 bp Feature: domain Description: COG351 5 Location: 39071 -39599 bp Feature: domain Description: VasL Location: 39926-40358 bp Feature: domain Description: VasL Location: 39926-40358 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, COG3515 (Predicted component of the type VI protein secretion system ), VasL (pfam12486)

Seq: CABGMO010000009.1 (228708 bp)
Overview 1 RT 1: 6829-17845 bp Neighborhood of RT #1 [6829, 17880] RMtype1_S_EcoEI-TRD1-CR1_like RMtype1_S_EcoEI-TRD1-CR1_like HsdM RVT-UG1 RT_Bac_retron_II Arm-DNA-bind_3 INT_P4_C DjlA Feature: gene Location: 6829-8064 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 6844-7324 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 6844-732 4 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 7822-7966 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 782 2 -7966 bp Feature: gene Location: 8205-10565 bp Feature: domain Description: HsdM Location: 8229-9633 bp Feature: domain Description: HsdM Location: 82 2 9-9633 bp Feature: gene Location: 10773-14549 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 11391-11898 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 11391-11898 bp Feature: domain Description: RT_Bac_retron_II Location: 13704-13860 bp Feature: domain Description: RT_Bac_retron_II Location: 13704-13860 bp Feature: gene Location: 14842-16149 bp Feature: domain Description: Arm-DNA-bind_3 Location: 14857-15124 bp Feature: domain Description: Arm-DNA-bind_3 Location: 14857-1512 4 bp Feature: domain Description: INT_P4_C Location: 15541-16090 bp Feature: domain Description: INT_P4_C Location: 15541-16090 bp Feature: gene Location: 16711-17880 bp Feature: domain Description: DjlA Location: 17368-17845 bp Feature: domain Description: DjlA Location: 17368-17845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_EcoEI-TRD1-CR1_like (cd17260), HsdM (COG0286), RVT-UG1, RT_Bac_retron_II (cd03487), Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), DjlA (COG1076)