myRT

myRT report for GCA_902161405.1_25426_7_277

Download annotations/find similar RTs

Seq: CABGRI010000026.1 (40637 bp)
Overview 1 RT 1: 6735-10471 bp Neighborhood of RT #1 [6735, 10479] PHA02517 COG3547 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 6735-6941 bp Feature: domain Description: PHA02517 Location: 6738-6930 bp Feature: domain Description: PHA0251 7 Location: 6738-6930 bp Feature: gene Location: 7060-8136 bp Feature: domain Description: COG3547 Location: 7099-8023 bp Feature: domain Description: COG3547 Location: 7099-8023 bp Feature: gene Location: 8678-9433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8786-8915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8786-891 5 bp Feature: domain Description: GIIM Note: maturase Location: 9029-9209 bp Feature: domain Description: GIIM Note: maturase Location: 9029-9209 bp Feature: gene Location: 9734-10144 bp Feature: domain Description: PHA02517 Location: 9740-10079 bp Feature: domain Description: PHA0251 7 Location: 9740-1 0079 bp Feature: gene Location: 10201-10479 bp Feature: domain Description: InsE Location: 10213-10471 bp Feature: domain Description: InsE Location: 1 021 3-1 0471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: CABGRI010000021.1 (94800 bp)
Overview 1 RT 1: 61775-67517 bp Neighborhood of RT #1 [61775, 67519] Inovirus_Gp2 COG3950 RVT-Retrons PRK09692 Feature: gene Location: 61775-62455 bp Feature: domain Description: Inovirus_Gp2 Location: 61889-62441 bp Feature: domain Description: Inovirus_Gp2 Location: 61889-62 441 bp Feature: gene Location: 63295-64881 bp Feature: domain Description: COG3950 Location: 63475-64690 bp Feature: domain Description: COG3950 Location: 63475-64690 bp Feature: gene Location: 64862-65824 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 64970-65567 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 64970-65567 bp Feature: gene Location: 65852-66007 bp Feature: gene Location: 66278-67519 bp Feature: domain Description: PRK09692 Location: 66281-67517 bp Feature: domain Description: PRK09692 Location: 662 81-67517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Inovirus_Gp2 (pfam11726), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK09692 (Integrase; provisional)