myRT

myRT report for GCA_902166855.1_K6963

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Seq: CABHKL010000006.1 (138532 bp)
Overview 1 RT 1: 45513-50079 bp Neighborhood of RT #1 [45513, 50081] N6_acetyl_AAC6 RVT-GII GIIM Arr-ms PRK15417 Feature: gene Location: 45513-45746 bp Feature: gene Location: 45834-46388 bp Feature: domain Description: N6_acetyl_AAC6 Location: 45837-46386 bp Feature: domain Description: N6_acetyl_AAC6 Location: 45837-46386 bp Feature: gene Location: 47007-48362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47301-47925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47301 -47925 bp Feature: domain Description: GIIM Note: maturase Location: 47964-48183 bp Feature: domain Description: GIIM Note: maturase Location: 47964-481 83 bp Feature: gene Location: 48443-49069 bp Feature: domain Description: Arr-ms Location: 48677-48983 bp Feature: domain Description: Arr-ms Location: 48677-48983 bp Feature: gene Location: 49068-50081 bp Feature: domain Description: PRK15417 Location: 49071-50079 bp Feature: domain Description: PRK1 541 7 Location: 49071 -50079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_acetyl_AAC6 (TIGR04431), RVT-GII, GIIM (pfam08388), Arr-ms (pfam12120), PRK15417 (integron integrase)

Seq: CABHKL010000004.1 (5414054 bp)
Overview 1 RT 1: 96943-102010 bp 2 RT 2: 3601879-3606762 bp Neighborhood of RT #1 [96943, 102072] PiuB DUF2946 RVT-GII GIIM rplS trmD Neighborhood of RT #2 [3601879, 3606764] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 96943-98313 bp Feature: domain Description: PiuB Location: 96967-98266 bp Feature: domain Description: PiuB Location: 96967-982 66 bp Feature: gene Location: 98370-98828 bp Feature: domain Description: DUF2946 Location: 98418-98805 bp Feature: domain Description: DUF2 946 Location: 98418-98805 bp Feature: gene Location: 98951-100204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99143-99767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99143-99767 bp Feature: domain Description: GIIM Note: maturase Location: 99806-100025 bp Feature: domain Description: GIIM Note: maturase Location: 99806-10002 5 bp Feature: gene Location: 100918-101265 bp Feature: domain Description: rplS Location: 100927-101260 bp Feature: domain Description: rplS Location: 10092 7-1012 60 bp Feature: gene Location: 101305-102072 bp Feature: domain Description: trmD Location: 101308-102010 bp Feature: domain Description: trmD Location: 101308-102 010 bp Feature: gene Location: 3601879-3603144 bp Feature: domain Description: umuC Location: 3601882-3603142 bp Feature: domain Description: umuC Location: 3601882 -3603142 bp Feature: gene Location: 3603369-3603557 bp Feature: gene Location: 3603817-3604725 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 3604090-3604546 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 3604090-3604546 bp Feature: gene Location: 3604926-3605594 bp Feature: domain Description: PRK09951 Location: 3604929-3605592 bp Feature: domain Description: PRK09951 Location: 360492 9-3605592 bp Feature: gene Location: 3605799-3606764 bp Feature: domain Description: PRK15110 Location: 3605802-3606762 bp Feature: domain Description: PRK15110 Location: 3605802 -3606762 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PiuB (COG3182), DUF2946 (pfam11162), RVT-GII, GIIM (pfam08388), rplS (PRK05338), trmD (TIGR00088), umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: CABHKL010000002.1 (19711 bp)
Overview 1 RT 1: 1-3532 bp 2 RT 2: 18044-19694 bp Neighborhood of RT #1 [1, 3537] RVT-GII GIIM DHFR PRK15417 Neighborhood of RT #2 [18044, 19708] DUF1010 RVT-GII Feature: gene Location: 1-423 bp Feature: gene Location: 487-618 bp Feature: gene Location: 1134-2489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1428-2052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1428-2052 bp Feature: domain Description: GIIM Note: maturase Location: 2091-2310 bp Feature: domain Description: GIIM Note: maturase Location: 2091-23 10 bp Feature: gene Location: 2558-3040 bp Feature: domain Description: DHFR Location: 2576-3032 bp Feature: domain Description: DHFR Location: 2576-3 03 2 bp Feature: gene Location: 3187-3537 bp Feature: domain Description: PRK15417 Location: 3190-3532 bp Feature: domain Description: PRK15417 Location: 3 190-3 53 2 bp Feature: gene Location: 18044-18175 bp Feature: gene Location: 18229-18393 bp Feature: domain Description: DUF1010 Location: 18244-18361 bp Feature: domain Description: DUF1010 Location: 18244-183 61 bp Feature: gene Location: 19064-19708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19253-19694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19253 -19694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DHFR (cl17279), PRK15417 (integron integrase), DUF1010 (pfam06231)

Seq: CABHKL010000003.1 (110723 bp)
Overview 1 RT 1: 10854-15858 bp 2 RT 2: 37620-41987 bp 3 RT 3: 61872-66314 bp 4 RT 4: 95707-100133 bp Neighborhood of RT #1 [10854, 15860] Rve RVT-GII GIIM DHFR PRK15417 Neighborhood of RT #2 [37620, 41989] DHFR_1 RVT-GII GIIM Multi_Drug_Res PRK13753 Neighborhood of RT #3 [61872, 66316] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Neighborhood of RT #4 [95707, 100133] Rve RVT-GII GIIM DHFR_1 Feature: gene Location: 10854-11648 bp Feature: domain Description: Rve Location: 10905-11523 bp Feature: domain Description: Rve Location: 10905-11523 bp Feature: gene Location: 11647-12081 bp Feature: gene Location: 12794-14149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13088-13712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13088-13712 bp Feature: domain Description: GIIM Note: maturase Location: 13751-13970 bp Feature: domain Description: GIIM Note: maturase Location: 13751-13970 bp Feature: gene Location: 14218-14700 bp Feature: domain Description: DHFR Location: 14236-14692 bp Feature: domain Description: DHFR Location: 14 236-14 692 bp Feature: gene Location: 14847-15860 bp Feature: domain Description: PRK15417 Location: 14850-15858 bp Feature: domain Description: PRK154 17 Location: 14 850-15858 bp Feature: gene Location: 37620-37838 bp Feature: gene Location: 37835-38332 bp Feature: domain Description: DHFR_1 Location: 37859-38306 bp Feature: domain Description: DHFR_1 Location: 37859-38306 bp Feature: gene Location: 38751-40106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39045-39669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3904 5-39669 bp Feature: domain Description: GIIM Note: maturase Location: 39708-39927 bp Feature: domain Description: GIIM Note: maturase Location: 39708-39927 bp Feature: gene Location: 40809-41156 bp Feature: domain Description: Multi_Drug_Res Location: 40818-41091 bp Feature: domain Description: Multi_Drug_Res Location: 4 0818-4 1091 bp Feature: gene Location: 41150-41989 bp Feature: domain Description: PRK13753 Location: 41153-41987 bp Feature: domain Description: PRK13753 Location: 4 1153-4 1987 bp Feature: gene Location: 61872-63143 bp Feature: domain Description: umuC Location: 61875-63135 bp Feature: domain Description: umuC Location: 61875-63135 bp Feature: gene Location: 63143-63826 bp Feature: domain Description: PRK10276 Location: 63446-63809 bp Feature: domain Description: PRK10276 Location: 634 4 6-63809 bp Feature: gene Location: 63980-65467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64385-65075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64 385-65075 bp Feature: gene Location: 65619-65894 bp Feature: domain Description: InsA Location: 65622-65886 bp Feature: domain Description: InsA Location: 65622-65886 bp Feature: gene Location: 65813-66316 bp Feature: domain Description: DDE_Tnp_IS1 Location: 65924-66314 bp Feature: domain Description: DDE_Tnp_IS1 Location: 65924 -66314 bp Feature: gene Location: 95707-96501 bp Feature: domain Description: Rve Location: 95758-96376 bp Feature: domain Description: Rve Location: 95758-96376 bp Feature: gene Location: 96500-96934 bp Feature: gene Location: 97647-99002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97941-98565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9794 1-98565 bp Feature: domain Description: GIIM Note: maturase Location: 98604-98823 bp Feature: domain Description: GIIM Note: maturase Location: 98604 -98823 bp Feature: gene Location: 99421-99918 bp Feature: domain Description: DHFR_1 Location: 99445-99892 bp Feature: domain Description: DHFR_1 Location: 994 4 5-99892 bp Feature: gene Location: 99915-100133 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII, GIIM (pfam08388), DHFR (cl17279), PRK15417 (integron integrase), DHFR_1 (pfam00186), Multi_Drug_Res (pfam00893), PRK13753 (dihydropteroate synthase; Provisional), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)
InsA (COG3677), DDE_Tnp_IS1 (pfam03400)