myRT

myRT report for GCA_902166945.1_K4019

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Seq: CABHKR010000001.1 (5265318 bp)
Overview 1 RT 1: 3419858-3426726 bp Neighborhood of RT #1 [3419858, 3426728] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 3419858-3420586 bp Feature: domain Description: FimC Location: 3419906-3420569 bp Feature: domain Description: FimC Location: 341 9906-3420569 bp Feature: gene Location: 3420618-3423227 bp Feature: domain Description: FimD Location: 3420675-3423216 bp Feature: domain Description: FimD Location: 3420675-342321 6 bp Feature: gene Location: 3423227-3425305 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3423635-3424079 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3423635-3424079 bp Feature: gene Location: 3425362-3425802 bp Feature: domain Description: Integrase_1 Location: 3425368-3425584 bp Feature: domain Description: Integrase_1 Location: 3425368-3425584 bp Feature: gene Location: 3426063-3426728 bp Feature: domain Description: INT_P4_C Location: 3426168-3426726 bp Feature: domain Description: INT_P4_C Location: 34261 68-3426726 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: CABHKR010000003.1 (320304 bp)
Overview 1 RT 1: 69514-73321 bp Neighborhood of RT #1 [69514, 73341] INT_Cre_C RVT-GII HHA Feature: gene Location: 69514-69831 bp Feature: gene Location: 69897-71033 bp Feature: domain Description: INT_Cre_C Location: 70320-70974 bp Feature: domain Description: INT_Cre_C Location: 7032 0-70974 bp Feature: gene Location: 71240-72586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71624-72155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7162 4-72 155 bp Feature: gene Location: 72611-73000 bp Feature: gene Location: 73090-73341 bp Feature: domain Description: HHA Location: 73138-73321 bp Feature: domain Description: HHA Location: 73138-7332 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII, HHA (pfam05321)