myRT

myRT report for GCA_902167715.1_NZ_Blautia_luti_RSSSTS7063_SV_a2_mod

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Seq: CABHMX010000036.1 (30673 bp)
Overview 1 RT 1: 5734-10576 bp Neighborhood of RT #1 [5734, 10576] YIH1 MrcB MrcB RVT-GII GIIM Feature: gene Location: 5734-6390 bp Feature: domain Description: YIH1 Location: 5743-6331 bp Feature: domain Description: YIH1 Location: 5743-6331 bp Feature: gene Location: 6569-9214 bp Feature: domain Description: MrcB Location: 6644-7697 bp Feature: domain Description: MrcB Location: 6644-7697 bp Feature: domain Description: MrcB Location: 7883-9104 bp Feature: domain Description: MrcB Location: 7883-91 04 bp Feature: gene Location: 9266-9871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9308-9473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9308-9473 bp Feature: domain Description: GIIM Note: maturase Location: 9527-9752 bp Feature: domain Description: GIIM Note: maturase Location: 9527-9752 bp Feature: gene Location: 10080-10265 bp Feature: gene Location: 10331-10576 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YIH1 (COG1739), MrcB (COG0744), RVT-GII, GIIM (pfam08388)

Seq: CABHMX010000004.1 (113321 bp)
Overview 1 RT 1: 74250-80164 bp 2 RT 2: 107422-113106 bp Neighborhood of RT #1 [74250, 80313] SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 RVT-GII Intron_maturas2 HNHc LPD26 SpoVG Neighborhood of RT #2 [107422, 113120] RVT-UG24 DDE_Tnp_IS66 DDE_Tnp_IS66_C DDE_Tnp_IS66 Feature: gene Location: 74250-75947 bp Feature: domain Description: SR_TndX_transposase Location: 74310-74718 bp Feature: domain Description: SR_TndX_transposase Location: 74310-74718 bp Feature: domain Description: Recombinase Location: 74823-75204 bp Feature: domain Description: Recombinase Location: 7482 3-752 04 bp Feature: domain Description: Zn_ribbon_recom Location: 75237-75417 bp Feature: domain Description: Zn_ribbon_recom Location: 752 37-75417 bp Feature: domain Description: DUF4368 Location: 75693-75891 bp Feature: domain Description: DUF4368 Location: 75693-75891 bp Feature: gene Location: 76112-76780 bp Feature: gene Location: 77356-79188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77620-78451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7762 0-78451 bp Feature: domain Description: Intron_maturas2 Location: 78523-78838 bp Feature: domain Description: Intron_maturas2 Location: 7852 3-78838 bp Feature: domain Description: HNHc Note: nucleases Location: 78985-79159 bp Feature: domain Description: HNHc Note: nucleases Location: 78985-79159 bp Feature: gene Location: 79264-79566 bp Feature: gene Location: 79582-80313 bp Feature: domain Description: LPD26 Location: 79609-79684 bp Feature: domain Description: LPD2 6 Location: 79609-79684 bp Feature: domain Description: SpoVG Location: 79933-80164 bp Feature: domain Description: SpoVG Location: 79933-80164 bp Feature: gene Location: 107422-108285 bp Feature: gene Location: 108410-108838 bp Feature: gene Location: 108819-112175 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 109326-109800 bp Feature: RT Description: RVT-UG2 4 Note: UG2 4 RT Location: 10932 6-109800 bp Feature: gene Location: 112449-112865 bp Feature: domain Description: DDE_Tnp_IS66 Location: 112452-112674 bp Feature: domain Description: DDE_Tnp_IS66 Location: 112 452 -112 674 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 112695-112818 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 112 695-112 818 bp Feature: gene Location: 112869-113120 bp Feature: domain Description: DDE_Tnp_IS66 Location: 112872-113106 bp Feature: domain Description: DDE_Tnp_IS66 Location: 112 872 -113106 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF4368 (pfam14287), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), LPD26 (pfam18842), SpoVG (pfam04026), RVT-UG24
DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)

Seq: CABHMX010000052.1 (10513 bp)
Overview 1 RT 1: 8060-10441 bp Neighborhood of RT #1 [8060, 10506] RepA_N RVT-GII Feature: gene Location: 8060-8614 bp Feature: domain Description: RepA_N Location: 8117-8339 bp Feature: domain Description: RepA_N Location: 8117-83 3 9 bp Feature: gene Location: 8639-9106 bp Feature: gene Location: 9703-10506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9952-10441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9952-10441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RepA_N (pfam06970), RVT-GII

Seq: CABHMX010000079.1 (866 bp)
Overview 1 RT 1: 1-413 bp Neighborhood of RT #1 [1, 766] RVT-GII Feature: gene Location: 1-159 bp Feature: gene Location: 257-766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263-413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263-4 13 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CABHMX010000019.1 (65464 bp)
Overview 1 RT 1: 24-11306 bp Neighborhood of RT #1 [24, 11329] ArdC RVT_N RVT-GII YkfC YtxK COG4646 HepA Feature: gene Location: 24-782 bp Feature: domain Description: ArdC Location: 231-687 bp Feature: domain Description: ArdC Location: 231-687 bp Feature: gene Location: 840-1898 bp Feature: gene Location: 1899-3569 bp Feature: domain Description: RVT_N Location: 1944-2187 bp Feature: domain Description: RVT_N Location: 1944-2187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2232-2880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2232-2880 bp Feature: domain Description: YkfC Location: 2988-3183 bp Feature: domain Description: YkfC Location: 2988-3183 bp Feature: gene Location: 3645-3791 bp Feature: gene Location: 4148-11329 bp Feature: domain Description: YtxK Location: 7445-8207 bp Feature: domain Description: YtxK Location: 7445 -8207 bp Feature: domain Description: COG4646 Location: 8273-10832 bp Feature: domain Description: COG4646 Location: 8273-10832 bp Feature: domain Description: HepA Location: 11174-11306 bp Feature: domain Description: HepA Location: 11174-11306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), YtxK (COG0827), COG4646 (Adenine-specific DNA methylase, N12 class ), HepA (COG0553)