myRT

myRT report for GCA_902167735.1_Dorea_longicatena_SSTS_Bg7063

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Seq: CABHNM010000007.1 (2589 bp)
Overview 1 RT 1: 1-2456 bp Neighborhood of RT #1 [1, 2485] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-222 bp Feature: gene Location: 653-2485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 917-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 7-1 748 bp Feature: domain Description: Intron_maturas2 Location: 1820-2135 bp Feature: domain Description: Intron_maturas2 Location: 1 820-21 35 bp Feature: domain Description: HNHc Note: nucleases Location: 2282-2456 bp Feature: domain Description: HNHc Note: nucleases Location: 2282-2456 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CABHNM010000079.1 (150922 bp)
Overview 1 RT 1: 68270-74244 bp Neighborhood of RT #1 [68270, 74249] RVT-Retrons KOG0519 PBP2_BvgS_HisK_like PBP2_BvgS_HisK_like TMAO_torS Feature: gene Location: 68270-69295 bp Feature: gene Location: 69366-69578 bp Feature: gene Location: 69749-71023 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 69956-70481 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 69956-70481 bp Feature: gene Location: 71124-71429 bp Feature: domain Description: KOG0519 Location: 71133-71415 bp Feature: domain Description: KOG0519 Location: 71133-71415 bp Feature: gene Location: 71481-74249 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 71628-72207 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 7162 8-72 2 07 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 72303-72930 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 72 303-72 930 bp Feature: domain Description: TMAO_torS Location: 73077-74244 bp Feature: domain Description: TMAO_torS Location: 73077-742 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, KOG0519 (KOG0519, Sensory transduction histidine kinase ), PBP2_BvgS_HisK_like (cd01007), TMAO_torS (TIGR02956)

Seq: CABHNM010000018.1 (87564 bp)
Overview 1 RT 1: 508-5487 bp Neighborhood of RT #1 [508, 5498] RVT-UG2 Mrr_cat PLDc_N_DEXD_b2 SSL2 DUF3427 Feature: gene Location: 508-1821 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 694-1507 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 694-1507 bp Feature: gene Location: 1950-2516 bp Feature: domain Description: Mrr_cat Location: 1980-2325 bp Feature: domain Description: Mrr_cat Location: 1980-23 25 bp Feature: gene Location: 2526-5498 bp Feature: domain Description: PLDc_N_DEXD_b2 Location: 2676-3096 bp Feature: domain Description: PLDc_N_DEXD_b2 Location: 2676-3 096 bp Feature: domain Description: SSL2 Location: 3147-4542 bp Feature: domain Description: SSL2 Location: 3 147-4542 bp Feature: domain Description: DUF3427 Location: 4656-5487 bp Feature: domain Description: DUF3 427 Location: 4656-5487 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, Mrr_cat (pfam04471), PLDc_N_DEXD_b2 (cd09204), SSL2 (COG1061), DUF3427 (pfam11907)

Seq: CABHNM010000077.1 (22798 bp)
Overview 1 RT 1: 17976-22083 bp Neighborhood of RT #1 [17976, 22091] Maff2 RVT-GII HNHc YozG TnpV Feature: gene Location: 17976-18188 bp Feature: gene Location: 18399-18530 bp Feature: domain Description: Maff2 Location: 18402-18528 bp Feature: domain Description: Maff2 Location: 184 02-18528 bp Feature: gene Location: 19250-21136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19583-20321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19583-20321 bp Feature: domain Description: HNHc Note: nucleases Location: 20870-21020 bp Feature: domain Description: HNHc Note: nucleases Location: 20870-21020 bp Feature: gene Location: 21482-21754 bp Feature: domain Description: YozG Location: 21491-21692 bp Feature: domain Description: YozG Location: 214 91-21692 bp Feature: gene Location: 21714-22091 bp Feature: domain Description: TnpV Location: 21759-22083 bp Feature: domain Description: TnpV Location: 21759-22083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Maff2 (pfam12750), RVT-GII, HNHc (smart00507), YozG (COG3655), TnpV (pfam14198)

Seq: CABHNM010000039.1 (11218 bp)
Overview 1 RT 1: 76-1598 bp Neighborhood of RT #1 [76, 1598] RVT-Retrons Transposase_20 Feature: gene Location: 76-489 bp Feature: gene Location: 542-787 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 662-755 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 662-75 5 bp Feature: gene Location: 895-1296 bp Feature: domain Description: Transposase_20 Location: 928-1180 bp Feature: domain Description: Transposase_20 Location: 928-1180 bp Feature: gene Location: 1356-1598 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Transposase_20 (pfam02371)

Seq: CABHNM010000016.1 (71427 bp)
Overview 1 RT 1: 19611-23637 bp Neighborhood of RT #1 [19611, 23657] RVT-GII PRK14059 Feature: gene Location: 19611-19898 bp Feature: gene Location: 20321-20464 bp Feature: gene Location: 20451-20891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20661-20832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 206 6 1-20832 bp Feature: gene Location: 21137-22597 bp Feature: gene Location: 22632-23657 bp Feature: domain Description: PRK14059 Location: 22860-23637 bp Feature: domain Description: PRK14059 Location: 2286 0-236 37 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK14059 (pyrimidine reductase family protein)