myRT

myRT report for GCA_902167855.1_NZ_Enterococcus_avium_EASS39_a2_mod

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Seq: CABHNP010000071.1 (1871 bp)
Overview 1 RT 1: 143-1708 bp Neighborhood of RT #1 [143, 1794] RVT-GII GIIM Feature: gene Location: 143-274 bp Feature: gene Location: 550-1794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 754-1411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 754-1 41 1 bp Feature: domain Description: GIIM Note: maturase Location: 1492-1708 bp Feature: domain Description: GIIM Note: maturase Location: 1 492-1 708 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CABHNP010000074.1 (1650 bp)
Overview 1 RT 1: 2-1647 bp Neighborhood of RT #1 [2, 1647] RVT-GII Feature: gene Location: 2-913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368-914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368-914 bp Feature: gene Location: 1507-1647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CABHNP010000084.1 (799 bp)
Overview 1 RT 1: 77-452 bp Neighborhood of RT #1 [77, 631] RVT-GII GIIM Feature: gene Location: 77-631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89-179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89-179 bp Feature: domain Description: GIIM Note: maturase Location: 236-452 bp Feature: domain Description: GIIM Note: maturase Location: 23 6-452 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CABHNP010000037.1 (29862 bp)
Overview 1 RT 1: 136-2738 bp 2 RT 2: 7038-12062 bp 3 RT 3: 23645-27923 bp Neighborhood of RT #1 [136, 2758] RVT-GII HNHc FtsK Dcm Neighborhood of RT #2 [7038, 12097] RVT-GII HNHc AAA_10 Neighborhood of RT #3 [23645, 27958] Arm-DNA-bind_4 Phage_int_SAM_3 INT_ICEBs1_C_like RVT-GII KOG4768 Relaxase Feature: gene Location: 136-1089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142-277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 2-277 bp Feature: domain Description: HNHc Note: nucleases Location: 817-976 bp Feature: domain Description: HNHc Note: nucleases Location: 817-976 bp Feature: gene Location: 1191-1571 bp Feature: domain Description: FtsK Location: 1206-1443 bp Feature: domain Description: FtsK Location: 1206-14 4 3 bp Feature: gene Location: 1616-2758 bp Feature: domain Description: Dcm Location: 1619-2738 bp Feature: domain Description: Dcm Location: 1619-2738 bp Feature: gene Location: 7038-8297 bp Feature: gene Location: 8300-8449 bp Feature: gene Location: 8975-10111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9272-9971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9272-9971 bp Feature: gene Location: 10160-10777 bp Feature: domain Description: HNHc Note: nucleases Location: 10526-10664 bp Feature: domain Description: HNHc Note: nucleases Location: 10526-10664 bp Feature: gene Location: 10817-12097 bp Feature: domain Description: AAA_10 Location: 10979-12062 bp Feature: domain Description: AAA_10 Location: 10979-12062 bp Feature: gene Location: 23645-24085 bp Feature: gene Location: 24394-25536 bp Feature: domain Description: Arm-DNA-bind_4 Location: 24439-24568 bp Feature: domain Description: Arm-DNA-bind_4 Location: 24 4 39-24 568 bp Feature: domain Description: Phage_int_SAM_3 Location: 24595-24763 bp Feature: domain Description: Phage_int_SAM_3 Location: 24 595-24 763 bp Feature: domain Description: INT_ICEBs1_C_like Location: 24952-25480 bp Feature: domain Description: INT_ICEBs1_C_like Location: 24 952-254 80 bp Feature: gene Location: 26215-26877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26299-26740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26299-2674 0 bp Feature: gene Location: 26792-27064 bp Feature: domain Description: KOG4768 Location: 26816-27017 bp Feature: domain Description: KOG4 768 Location: 26816-27017 bp Feature: gene Location: 27596-27958 bp Feature: domain Description: Relaxase Location: 27626-27923 bp Feature: domain Description: Relaxase Location: 27626-27923 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), FtsK (COG1674), Dcm (COG0270), AAA_10 (pfam12846), Arm-DNA-bind_4 (pfam14657), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), Relaxase (pfam03432)

Seq: CABHNP010000006.1 (96547 bp)
Overview 1 RT 1: 92813-96430 bp Neighborhood of RT #1 [92813, 96438] peptidase-T LPG_synthase_TM RVT-GII Feature: gene Location: 92813-94042 bp Feature: domain Description: peptidase-T Location: 92819-94037 bp Feature: domain Description: peptidase-T Location: 92819-94037 bp Feature: gene Location: 94145-95179 bp Feature: domain Description: LPG_synthase_TM Location: 94184-95102 bp Feature: domain Description: LPG_synthase_TM Location: 94184-95 102 bp Feature: gene Location: 95635-96438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95956-96430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95 95 6-96430 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT peptidase-T (TIGR01882), LPG_synthase_TM (pfam03706), RVT-GII

Seq: CABHNP010000012.1 (180619 bp)
Overview 1 RT 1: 91122-99689 bp Neighborhood of RT #1 [91122, 99844] RVT-GII HNHc Peptidase_M23 NlpD TraC-F-type Feature: gene Location: 91122-91415 bp Feature: gene Location: 91419-92189 bp Feature: gene Location: 92378-94171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92672-93368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 926 72-9336 8 bp Feature: domain Description: HNHc Note: nucleases Location: 93917-94058 bp Feature: domain Description: HNHc Note: nucleases Location: 93917-94058 bp Feature: gene Location: 94848-97505 bp Feature: domain Description: Peptidase_M23 Location: 96252-96447 bp Feature: domain Description: Peptidase_M23 Location: 96 252-96 447 bp Feature: domain Description: NlpD Location: 97110-97473 bp Feature: domain Description: NlpD Location: 97110-97473 bp Feature: gene Location: 97517-99844 bp Feature: domain Description: TraC-F-type Location: 98159-99689 bp Feature: domain Description: TraC-F-type Location: 98159-996 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Peptidase_M23 (pfam01551), NlpD (COG0739), TraC-F-type (TIGR02746)