myRT

myRT report for GCA_902167935.1_Clostridium_symbiosum_TS_8243C_mod2

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Seq: CABHNX010000112.1 (115526 bp)
Overview 1 RT 1: 43356-45914 bp Neighborhood of RT #1 [43356, 45991] MdlB ZupT RVT-GII HipB Feature: gene Location: 43356-43688 bp Feature: domain Description: MdlB Location: 43488-43659 bp Feature: domain Description: MdlB Location: 43488-43659 bp Feature: gene Location: 43802-44569 bp Feature: domain Description: ZupT Location: 43820-44567 bp Feature: domain Description: ZupT Location: 43820-44567 bp Feature: gene Location: 44688-45266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44868-45207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44868-45207 bp Feature: gene Location: 45322-45504 bp Feature: gene Location: 45641-45991 bp Feature: domain Description: HipB Location: 45677-45914 bp Feature: domain Description: HipB Location: 45677-4591 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABHNX010000187.1 (634 bp)
Overview 1 RT 1: 2-626 bp Neighborhood of RT #1 [2, 631] RVT-GII GIIM Feature: gene Location: 2-631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14-443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14-443 bp Feature: domain Description: GIIM Note: maturase Location: 497-626 bp Feature: domain Description: GIIM Note: maturase Location: 497-62 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABHNX010000117.1 (2590 bp)
Overview 1 RT 1: 2-2457 bp Neighborhood of RT #1 [2, 2486] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 2-232 bp Feature: gene Location: 654-2486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 918-1749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 918-1749 bp Feature: domain Description: Intron_maturas2 Location: 1821-2136 bp Feature: domain Description: Intron_maturas2 Location: 1821-213 6 bp Feature: domain Description: HNHc Note: nucleases Location: 2283-2457 bp Feature: domain Description: HNHc Note: nucleases Location: 2283 -2457 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABHNX010000085.1 (5190 bp)
Overview 1 RT 1: 772-4862 bp Neighborhood of RT #1 [772, 4903] RpoE RVT-GII GIIM COG3666 DDE_Tnp_1_6 Feature: gene Location: 772-948 bp Feature: gene Location: 1171-1548 bp Feature: domain Description: RpoE Location: 1351-1543 bp Feature: domain Description: RpoE Location: 1351-154 3 bp Feature: gene Location: 1666-2907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1870-2527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1870-2527 bp Feature: domain Description: GIIM Note: maturase Location: 2608-2821 bp Feature: domain Description: GIIM Note: maturase Location: 2608-2821 bp Feature: gene Location: 3500-4903 bp Feature: domain Description: COG3666 Location: 3527-3971 bp Feature: domain Description: COG3666 Location: 3527-3971 bp Feature: domain Description: DDE_Tnp_1_6 Location: 4511-4862 bp Feature: domain Description: DDE_Tnp_1_6 Location: 4 511-4 862 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABHNX010000126.1 (1950 bp)
Overview 1 RT 1: 41-1499 bp Neighborhood of RT #1 [41, 1831] RVT-GII Intron_maturas2 Feature: gene Location: 41-1831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308-1121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308-1121 bp Feature: domain Description: Intron_maturas2 Location: 1205-1499 bp Feature: domain Description: Intron_maturas2 Location: 1205 -1499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABHNX010000194.1 (544 bp)
Overview 1 RT 1: 3-543 bp Neighborhood of RT #1 [3, 542] RVT-GII Feature: gene Location: 3-542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 204-543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 204-543 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABHNX010000248.1 (26833 bp)
Overview 1 RT 1: 21329-26431 bp Neighborhood of RT #1 [21329, 26433] MviM MviM LysR RVT-Retrons YuiF Feature: gene Location: 21329-22513 bp Feature: domain Description: MviM Location: 21350-21647 bp Feature: domain Description: MviM Location: 21350-21647 bp Feature: domain Description: MviM Location: 21722-22505 bp Feature: domain Description: MviM Location: 217 22-22505 bp Feature: gene Location: 22835-23779 bp Feature: domain Description: LysR Location: 22874-23732 bp Feature: domain Description: LysR Location: 2287 4-237 32 bp Feature: gene Location: 23827-24813 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23992-24547 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23992-24547 bp Feature: gene Location: 24841-25053 bp Feature: gene Location: 25111-26433 bp Feature: domain Description: YuiF Location: 25132-26431 bp Feature: domain Description: YuiF Location: 25132-26431 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABHNX010000050.1 (9853 bp)
Overview 1 RT 1: 2020-7873 bp Neighborhood of RT #1 [2020, 8019] RVT-GII Intron_maturas2 VirB4_CagE VirB4_CagE PrgI Feature: gene Location: 2020-2712 bp Feature: gene Location: 2819-3040 bp Feature: gene Location: 3215-5005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3482-4295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 348 2-4295 bp Feature: domain Description: Intron_maturas2 Location: 4379-4676 bp Feature: domain Description: Intron_maturas2 Location: 4379-4676 bp Feature: gene Location: 5499-7640 bp Feature: domain Description: VirB4_CagE Location: 5586-6018 bp Feature: domain Description: VirB4_CagE Location: 558 6-6018 bp Feature: domain Description: VirB4_CagE Location: 6264-7602 bp Feature: domain Description: VirB4_CagE Location: 6264-7602 bp Feature: gene Location: 7588-8019 bp Feature: domain Description: PrgI Location: 7603-7873 bp Feature: domain Description: PrgI Location: 7603-78 73 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT