myRT

myRT report for GCA_902167965.1_Clostridium_amygdalinum_SV_Bg7063_mod2

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Seq: CABHNS010000065.1 (65056 bp)
Overview 1 RT 1: 248-2626 bp Neighborhood of RT #1 [248, 2631] RVT-DGRs Phage_XkdX Feature: gene Location: 248-568 bp Feature: gene Location: 594-1790 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 789-1512 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 789-1 51 2 bp Feature: gene Location: 2003-2491 bp Feature: gene Location: 2488-2631 bp Feature: domain Description: Phage_XkdX Location: 2509-2626 bp Feature: domain Description: Phage_XkdX Location: 2509-2626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABHNS010000057.1 (70419 bp)
Overview 1 RT 1: 66523-70277 bp Neighborhood of RT #1 [66523, 70277] COG3910 DUF4261 RVT-GII YdiL Feature: gene Location: 66523-67239 bp Feature: domain Description: COG3910 Location: 66538-67219 bp Feature: domain Description: COG3910 Location: 66538-672 19 bp Feature: gene Location: 67347-68288 bp Feature: domain Description: DUF4261 Location: 68013-68256 bp Feature: domain Description: DUF42 61 Location: 68013-682 56 bp Feature: gene Location: 68440-69264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68566-68914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68566-68914 bp Feature: gene Location: 69428-69838 bp Feature: domain Description: YdiL Location: 69443-69827 bp Feature: domain Description: YdiL Location: 69443-6982 7 bp Feature: gene Location: 70050-70277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABHNS010000051.1 (688 bp)
Overview 1 RT 1: 1-673 bp Neighborhood of RT #1 [1, 687] RVT-GII Feature: gene Location: 1-687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABHNS010000018.1 (1865 bp)
Overview 1 RT 1: 3-1627 bp Neighborhood of RT #1 [3, 1791] RVT-GII GIIM Feature: gene Location: 3-212 bp Feature: gene Location: 514-1791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 727-1345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 727-134 5 bp Feature: domain Description: GIIM Note: maturase Location: 1402-1627 bp Feature: domain Description: GIIM Note: maturase Location: 14 02-1627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABHNS010000001.1 (331169 bp)
Overview 1 RT 1: 9283-26070 bp Neighborhood of RT #1 [9283, 27332] PRK07726 YtxK COG4646 KOG1000 RVT_N RVT-GII YkfC ArdC YodL DUF3849 LPD18 LPD16 LPD16 Feature: gene Location: 9283-11379 bp Feature: domain Description: PRK07726 Location: 9298-11167 bp Feature: domain Description: PRK07726 Location: 9298-11167 bp Feature: gene Location: 11398-18609 bp Feature: domain Description: YtxK Location: 14692-15484 bp Feature: domain Description: YtxK Location: 14692-15 484 bp Feature: domain Description: COG4646 Location: 15553-18112 bp Feature: domain Description: COG4646 Location: 15 5 5 3-18112 bp Feature: domain Description: KOG1000 Location: 18466-18592 bp Feature: domain Description: KOG1000 Location: 18466-185 92 bp Feature: gene Location: 19188-20858 bp Feature: domain Description: RVT_N Location: 19233-19476 bp Feature: domain Description: RVT_N Location: 19233-19476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19521-20169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195 21-20169 bp Feature: domain Description: YkfC Location: 20277-20472 bp Feature: domain Description: YkfC Location: 20277-20472 bp Feature: gene Location: 20859-21917 bp Feature: gene Location: 21957-27332 bp Feature: domain Description: ArdC Location: 22179-22770 bp Feature: domain Description: ArdC Location: 22179-22770 bp Feature: domain Description: YodL Location: 23997-24288 bp Feature: domain Description: YodL Location: 23997-24288 bp Feature: domain Description: DUF3849 Location: 24345-24720 bp Feature: domain Description: DUF3849 Location: 24345 -24720 bp Feature: domain Description: LPD18 Location: 24759-25005 bp Feature: domain Description: LPD18 Location: 2475 9-25 005 bp Feature: domain Description: LPD16 Location: 25515-25743 bp Feature: domain Description: LPD16 Location: 25 5 15 -25 743 bp Feature: domain Description: LPD16 Location: 25866-26070 bp Feature: domain Description: LPD16 Location: 25 866-26070 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABHNS010000029.1 (1361 bp)
Overview 1 RT 1: 3-1359 bp Neighborhood of RT #1 [3, 1358] RVT-GII Intron_maturas2 Feature: gene Location: 3-1358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-1038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-1038 bp Feature: domain Description: Intron_maturas2 Location: 1107-1359 bp Feature: domain Description: Intron_maturas2 Location: 1107-1359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABHNS010000108.1 (20669 bp)
Overview 1 RT 1: 15185-20608 bp Neighborhood of RT #1 [15185, 20613] DUF3801 T4SS-DNA_transf RVT-GII VirD4 Maff2 Feature: gene Location: 15185-15712 bp Feature: domain Description: DUF3801 Location: 15269-15692 bp Feature: domain Description: DUF3801 Location: 15269-15692 bp Feature: gene Location: 15709-16365 bp Feature: domain Description: T4SS-DNA_transf Location: 16159-16303 bp Feature: domain Description: T4SS-DNA_transf Location: 16159-16303 bp Feature: gene Location: 17104-18909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17362-18079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17 362-1807 9 bp Feature: gene Location: 18923-20320 bp Feature: domain Description: VirD4 Location: 19037-20150 bp Feature: domain Description: VirD4 Location: 19037 -20150 bp Feature: gene Location: 20455-20613 bp Feature: domain Description: Maff2 Location: 20458-20608 bp Feature: domain Description: Maff2 Location: 20458-20608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT