myRT

myRT report for GCA_902168145.1_MAG-Flavobacterium_sp_nbed44b64

Download annotations/find similar RTs

Seq: CABHOT010000002.1 uncultured Flavobacterium sp. isolate Flavobacterium_sp_nbed44b64 genome assembly, contig: NODE_20_length_524554_cov_92.6319_ID_39, whole genome shotgun sequence (524554 bp)
Overview 1 RT 1: 366933-372412 bp Neighborhood of RT #1 [366933, 372432] VirE_N RVT-UG28b Kinase-PolyVal Feature: gene Location: 366933-368075 bp Feature: gene Location: 368264-369235 bp Feature: domain Description: VirE_N Location: 368444-368798 bp Feature: domain Description: VirE_N Location: 368444-368798 bp Feature: gene Location: 369396-371237 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 369918-370617 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 36991 8-37061 7 bp Feature: gene Location: 371435-371713 bp Feature: gene Location: 371806-372432 bp Feature: domain Description: Kinase-PolyVal Location: 371941-372412 bp Feature: domain Description: Kinase-PolyVal Location: 371 941 -37241 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirE_N (pfam08800), RVT-UG28b, Kinase-PolyVal (pfam18762)

Seq: CABHOT010000006.1 uncultured Flavobacterium sp. isolate Flavobacterium_sp_nbed44b64 genome assembly, contig: NODE_12_length_590640_cov_93.4854_ID_23, whole genome shotgun sequence (590640 bp)
Overview 1 RT 1: 391972-399239 bp Neighborhood of RT #1 [391972, 399493] GH16_beta_agarase Por_Secre_tail RVT-UG12 YjgR YjgR SIR2_2 Feature: gene Location: 391972-393222 bp Feature: domain Description: GH16_beta_agarase Location: 392032-392944 bp Feature: domain Description: GH16_beta_agarase Location: 392 032 -392 944 bp Feature: domain Description: Por_Secre_tail Location: 393007-393220 bp Feature: domain Description: Por_Secre_tail Location: 393007-3932 2 0 bp Feature: gene Location: 393500-393712 bp Feature: gene Location: 394217-395884 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 394616-395054 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 394616-395054 bp Feature: gene Location: 395914-397863 bp Feature: domain Description: YjgR Location: 396202-396457 bp Feature: domain Description: YjgR Location: 3962 02 -396457 bp Feature: domain Description: YjgR Location: 397240-397714 bp Feature: domain Description: YjgR Location: 3972 40-397714 bp Feature: gene Location: 398027-399493 bp Feature: domain Description: SIR2_2 Location: 398762-399239 bp Feature: domain Description: SIR2 _2 Location: 398762 -3992 39 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GH16_beta_agarase (cd02178), Por_Secre_tail (TIGR04183), RVT-UG12, YjgR (COG0433), SIR2_2 (pfam13289)