myRT

myRT report for GCA_902168235.1_MAG-Cytophaga_sp_nbed16b14

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Seq: CABHOO010000015.1 (145672 bp)
Overview 1 RT 1: 142314-145449 bp Neighborhood of RT #1 [142314, 145613] COG4748 RVT-UG17 Feature: gene Location: 142314-143417 bp Feature: domain Description: COG4748 Location: 142317-143379 bp Feature: domain Description: COG4748 Location: 1 4231 7-1 43379 bp Feature: gene Location: 143479-144435 bp Feature: gene Location: 144642-145613 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 144852-145449 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 44852-1 45449 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4748 (Uncharacterized protein, contains restriction enzyme R protein N terminal (HSDR_N) domain ), RVT-UG17

Seq: CABHOO010000095.1 (6466 bp)
Overview 1 RT 1: 990-6457 bp Neighborhood of RT #1 [990, 6465] RVT-GII GIIM RVT-GII GIIM STN OMP_RagA_SusC Feature: gene Location: 990-1184 bp Feature: gene Location: 1325-1486 bp Feature: gene Location: 1650-3020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1974-2571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1974-2 571 bp Feature: domain Description: GIIM Note: maturase Location: 2679-2895 bp Feature: domain Description: GIIM Note: maturase Location: 2 679-2 895 bp Feature: gene Location: 3318-4592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3513-4128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3513-412 8 bp Feature: domain Description: GIIM Note: maturase Location: 4188-4404 bp Feature: domain Description: GIIM Note: maturase Location: 4188-4404 bp Feature: gene Location: 4798-6465 bp Feature: domain Description: STN Location: 5014-5158 bp Feature: domain Description: STN Location: 5014-5158 bp Feature: domain Description: OMP_RagA_SusC Location: 5200-6457 bp Feature: domain Description: OMP_RagA_SusC Location: 52 00-6457 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), STN (smart00965), OMP_RagA_SusC (TIGR04056)

Seq: CABHOO010000061.1 (50237 bp)
Overview 1 RT 1: 16957-21616 bp Neighborhood of RT #1 [16957, 21705] RVT-UG7 Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 16957-17139 bp Feature: gene Location: 17208-18341 bp Feature: gene Location: 18393-19994 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 18846-19248 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 18846-19248 bp Feature: gene Location: 20021-20209 bp Feature: gene Location: 20431-21705 bp Feature: domain Description: Arm-DNA-bind_5 Location: 20467-20725 bp Feature: domain Description: Arm-DNA-bind_5 Location: 20467-20725 bp Feature: domain Description: Phage_int_SAM_5 Location: 20767-21073 bp Feature: domain Description: Phage_int_SAM_5 Location: 20767-21073 bp Feature: domain Description: INTN1_C_like Location: 21130-21616 bp Feature: domain Description: INTN1_C_like Location: 2113 0-21616 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)