myRT

myRT report for GCA_902362285.1_MGYG-HGUT-00002

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Seq: CABIWD010000033.1 (36173 bp)
Overview 1 RT 1: 14279-18343 bp Neighborhood of RT #1 [14279, 18343] PRK03103 PolY_Pol_IV_kappa RVT_N RVT-GII GIIM HipB S24_LexA-like Feature: gene Location: 14279-14758 bp Feature: domain Description: PRK03103 Location: 14285-14756 bp Feature: domain Description: PRK031 03 Location: 1 4285-1 4756 bp Feature: gene Location: 14827-15189 bp Feature: domain Description: PolY_Pol_IV_kappa Location: 14953-15184 bp Feature: domain Description: PolY_Pol_IV_kappa Location: 1 4953-1 51 84 bp Feature: gene Location: 15186-16655 bp Feature: domain Description: RVT_N Location: 15231-15468 bp Feature: domain Description: RVT_N Location: 1 5231 -1 5468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15519-16167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 551 9-1 61 67 bp Feature: domain Description: GIIM Note: maturase Location: 16218-16452 bp Feature: domain Description: GIIM Note: maturase Location: 1 621 8-1 6452 bp Feature: gene Location: 17467-18177 bp Feature: domain Description: HipB Location: 17488-17836 bp Feature: domain Description: HipB Location: 1 7488-1 7836 bp Feature: domain Description: S24_LexA-like Location: 17932-18148 bp Feature: domain Description: S24_LexA-like Location: 1 7932-1 81 48 bp Feature: gene Location: 18170-18343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABIWD010000006.1 (254968 bp)
Overview 1 RT 1: 44646-52667 bp Neighborhood of RT #1 [44646, 52678] DUF3801 VirD4 RVT-GII T4SS-DNA_transf RVT-GII RVT-GII TraG-D_C Maff2 Feature: gene Location: 44646-45119 bp Feature: domain Description: DUF3801 Location: 44727-45093 bp Feature: domain Description: DUF3801 Location: 4472 7-45093 bp Feature: gene Location: 45116-45898 bp Feature: domain Description: VirD4 Location: 45335-45857 bp Feature: domain Description: VirD4 Location: 45335-45857 bp Feature: gene Location: 46557-48464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46887-47631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46887-47631 bp Feature: gene Location: 48611-49162 bp Feature: domain Description: T4SS-DNA_transf Location: 48659-49106 bp Feature: domain Description: T4SS-DNA_transf Location: 48659-49106 bp Feature: gene Location: 49920-50645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50229-50616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502 2 9-50616 bp Feature: gene Location: 50681-51829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50768-50984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50768-50984 bp Feature: gene Location: 51839-52474 bp Feature: domain Description: TraG-D_C Location: 51932-52250 bp Feature: domain Description: TraG-D_C Location: 51932 -52 2 50 bp Feature: gene Location: 52505-52678 bp Feature: domain Description: Maff2 Location: 52541-52667 bp Feature: domain Description: Maff2 Location: 52 541-52 667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABIWD010000010.1 (141812 bp)
Overview 1 RT 1: 40003-42824 bp Neighborhood of RT #1 [40003, 42824] TetR_N RVT-GII GIIM Feature: gene Location: 40003-40332 bp Feature: gene Location: 40521-41114 bp Feature: domain Description: TetR_N Location: 40581-40695 bp Feature: domain Description: TetR_N Location: 40581-40695 bp Feature: gene Location: 41346-41888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41355-41523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413 55-41523 bp Feature: domain Description: GIIM Note: maturase Location: 41604-41820 bp Feature: domain Description: GIIM Note: maturase Location: 41604-41820 bp Feature: gene Location: 42119-42355 bp Feature: gene Location: 42420-42824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABIWD010000026.1 (44559 bp)
Overview 1 RT 1: 73-7045 bp Neighborhood of RT #1 [73, 7443] COG4646 RVT-GII KOG1000 YodL LPD16 DUF4316 LPD25 Feature: gene Location: 73-813 bp Feature: domain Description: COG4646 Location: 85-454 bp Feature: domain Description: COG4 64 6 Location: 85-4 54 bp Feature: gene Location: 1500-1724 bp Feature: gene Location: 1739-3415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1820-2546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1820-254 6 bp Feature: gene Location: 3562-4605 bp Feature: domain Description: KOG1000 Location: 3571-3775 bp Feature: domain Description: KOG1000 Location: 3571-3775 bp Feature: gene Location: 4687-7443 bp Feature: domain Description: YodL Location: 5467-5761 bp Feature: domain Description: YodL Location: 54 67-5761 bp Feature: domain Description: LPD16 Location: 5791-6013 bp Feature: domain Description: LPD16 Location: 5791-6013 bp Feature: domain Description: DUF4316 Location: 6061-6145 bp Feature: domain Description: DUF4 316 Location: 6061-614 5 bp Feature: domain Description: LPD25 Location: 6754-7045 bp Feature: domain Description: LPD25 Location: 6754 -704 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABIWD010000005.1 (257129 bp)
Overview 1 RT 1: 236880-242589 bp Neighborhood of RT #1 [236880, 242963] COG3547 RVT-GII GIIM FepD FepC Feature: gene Location: 236880-237056 bp Feature: gene Location: 237157-238449 bp Feature: domain Description: COG3547 Location: 237214-238249 bp Feature: domain Description: COG35 47 Location: 237214-238249 bp Feature: gene Location: 239069-240463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 239423-240110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 239423-240110 bp Feature: domain Description: GIIM Note: maturase Location: 240176-240395 bp Feature: domain Description: GIIM Note: maturase Location: 240176-240395 bp Feature: gene Location: 240791-241861 bp Feature: domain Description: FepD Location: 240872-241853 bp Feature: domain Description: FepD Location: 240872-24185 3 bp Feature: gene Location: 241863-242963 bp Feature: domain Description: FepC Location: 241881-242589 bp Feature: domain Description: FepC Location: 241881-2425 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT