myRT

myRT report for GCA_902362455.1_MGYG-HGUT-00030

Download annotations/find similar RTs

Seq: CABIWJ010000014.1 (44211 bp)
Overview 1 RT 1: 153-3622 bp 2 RT 2: 37807-44210 bp Neighborhood of RT #1 [153, 3720] RVT-GII GIIM LytT SpoVG SpoVG Neighborhood of RT #2 [37807, 44210] Peptidase_M64 SHIRT IG IsdC RVT-GII GIIM Feature: gene Location: 153-395 bp Feature: gene Location: 521-1915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 839-1463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 839-1 463 bp Feature: domain Description: GIIM Note: maturase Location: 1520-1730 bp Feature: domain Description: GIIM Note: maturase Location: 1 520-1 730 bp Feature: gene Location: 1994-2782 bp Feature: domain Description: LytT Location: 2081-2759 bp Feature: domain Description: LytT Location: 2081 -2759 bp Feature: gene Location: 3178-3720 bp Feature: domain Description: SpoVG Location: 3181-3301 bp Feature: domain Description: SpoVG Location: 31 81 -3301 bp Feature: domain Description: SpoVG Location: 3358-3622 bp Feature: domain Description: SpoVG Location: 3358-3622 bp Feature: gene Location: 37807-41835 bp Feature: domain Description: Peptidase_M64 Location: 38917-39880 bp Feature: domain Description: Peptidase_M64 Location: 3891 7-39880 bp Feature: domain Description: SHIRT Location: 40516-40756 bp Feature: domain Description: SHIRT Location: 4051 6-40756 bp Feature: domain Description: IG Location: 41071-41314 bp Feature: domain Description: IG Location: 41 071 -41 31 4 bp Feature: domain Description: IsdC Location: 41593-41812 bp Feature: domain Description: IsdC Location: 41 593-41 81 2 bp Feature: gene Location: 42263-42406 bp Feature: gene Location: 42495-43673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42603-43218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42603-4321 8 bp Feature: domain Description: GIIM Note: maturase Location: 43281-43509 bp Feature: domain Description: GIIM Note: maturase Location: 43281 -43509 bp Feature: gene Location: 43812-44210 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), LytT (COG3279), SpoVG (pfam04026), Peptidase_M64 (pfam09471), SHIRT (pfam18655), IG (smart00409), IsdC (TIGR03656)

Seq: CABIWJ010000001.1 (415174 bp)
Overview 1 RT 1: 205275-210031 bp Neighborhood of RT #1 [205275, 210036] Tar RVT-UG26 COG2510 Feature: gene Location: 205275-205412 bp Feature: gene Location: 205841-207322 bp Feature: domain Description: Tar Location: 206243-207305 bp Feature: domain Description: Tar Location: 2 062 43-2 07305 bp Feature: gene Location: 207628-208857 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 207838-208453 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 2 07838-2 08453 bp Feature: gene Location: 209084-209611 bp Feature: gene Location: 209665-210036 bp Feature: domain Description: COG2510 Location: 209668-210031 bp Feature: domain Description: COG2 510 Location: 2 09668-2 10031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tar (COG0840), RVT-UG26, COG2510 (Uncharacterized membrane protein )

Seq: CABIWJ010000009.1 (125026 bp)
Overview 1 RT 1: 91483-98016 bp Neighborhood of RT #1 [91483, 98024] DUF3801 VirD4 RVT-GII KOG4768 VirD4 VOC_ShValD_like Feature: gene Location: 91483-92601 bp Feature: domain Description: DUF3801 Location: 91597-92557 bp Feature: domain Description: DUF3 801 Location: 91597-92557 bp Feature: gene Location: 92608-93174 bp Feature: domain Description: VirD4 Location: 92821-93130 bp Feature: domain Description: VirD4 Location: 92821-93 13 0 bp Feature: gene Location: 93860-95683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94160-94862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94160-94862 bp Feature: domain Description: KOG4768 Location: 94982-95096 bp Feature: domain Description: KOG4768 Location: 94982-95096 bp Feature: gene Location: 95820-97478 bp Feature: domain Description: VirD4 Location: 95835-96951 bp Feature: domain Description: VirD4 Location: 9583 5-96951 bp Feature: gene Location: 97572-98024 bp Feature: domain Description: VOC_ShValD_like Location: 97587-98016 bp Feature: domain Description: VOC_ShValD_like Location: 97587-98016 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3801 (pfam12687), VirD4 (COG3505), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), VOC_ShValD_like (cd16361)