myRT

myRT report for GCA_902362505.1_MGYG-HGUT-00039

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Seq: CABIWV010000001.1 (522669 bp)
Overview 1 RT 1: 416508-421356 bp Neighborhood of RT #1 [416508, 421356] Peptidase_M23 PG_binding_1 RVT-DGRs Feature: gene Location: 416508-417176 bp Feature: domain Description: Peptidase_M23 Location: 416586-416874 bp Feature: domain Description: Peptidase_M23 Location: 41 6586-41 6874 bp Feature: domain Description: PG_binding_1 Location: 417048-417162 bp Feature: domain Description: PG_binding_1 Location: 41 7048-41 71 62 bp Feature: gene Location: 417541-417873 bp Feature: gene Location: 417870-419111 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 418170-418761 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 41 81 70-41 8761 bp Feature: gene Location: 419328-419519 bp Feature: gene Location: 419632-421356 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABIWV010000013.1 (86190 bp)
Overview 1 RT 1: 60-10798 bp Neighborhood of RT #1 [60, 10908] MutS COG4646 RVT-GII COG4646 SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 FCS FCS Feature: gene Location: 60-221 bp Feature: gene Location: 308-5632 bp Feature: domain Description: MutS Location: 1892-2126 bp Feature: domain Description: MutS Location: 1892 -2 12 6 bp Feature: domain Description: COG4646 Location: 3596-5618 bp Feature: domain Description: COG4646 Location: 3596-5618 bp Feature: gene Location: 6332-8248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6656-7370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6656-7370 bp Feature: gene Location: 8475-8762 bp Feature: domain Description: COG4646 Location: 8478-8736 bp Feature: domain Description: COG4646 Location: 8478-8736 bp Feature: gene Location: 8812-10908 bp Feature: domain Description: SR_TndX_transposase Location: 8836-9253 bp Feature: domain Description: SR_TndX_transposase Location: 8836-92 53 bp Feature: domain Description: Recombinase Location: 9358-9718 bp Feature: domain Description: Recombinase Location: 9358-9718 bp Feature: domain Description: Zn_ribbon_recom Location: 9766-9946 bp Feature: domain Description: Zn_ribbon_recom Location: 9766-9946 bp Feature: domain Description: DUF4368 Location: 10222-10420 bp Feature: domain Description: DUF4368 Location: 102 2 2 -1042 0 bp Feature: domain Description: FCS Location: 10573-10657 bp Feature: domain Description: FCS Location: 10573-10657 bp Feature: domain Description: FCS Location: 10711-10798 bp Feature: domain Description: FCS Location: 10711-10798 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABIWV010000002.1 (318078 bp)
Overview 1 RT 1: 115430-119957 bp Neighborhood of RT #1 [115430, 119957] ChiA1_BD ChiA1_BD RVT-DGRs Avd_like Feature: gene Location: 115430-115939 bp Feature: domain Description: ChiA1_BD Location: 115604-115736 bp Feature: domain Description: ChiA1_BD Location: 115604-11573 6 bp Feature: domain Description: ChiA1_BD Location: 115793-115871 bp Feature: domain Description: ChiA1_BD Location: 115793 -115871 bp Feature: gene Location: 115932-117791 bp Feature: gene Location: 117706-118956 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 118006-118648 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 118006-118648 bp Feature: gene Location: 119315-119674 bp Feature: domain Description: Avd_like Location: 119366-119651 bp Feature: domain Description: Avd_like Location: 1193 66-119651 bp Feature: gene Location: 119640-119957 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABIWV010000024.1 (22324 bp)
Overview 1 RT 1: 4518-7840 bp Neighborhood of RT #1 [4518, 7908] RVT-Retrons PleD PleD Feature: gene Location: 4518-4775 bp Feature: gene Location: 4987-5199 bp Feature: gene Location: 5281-6210 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5368-5983 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5368-5983 bp Feature: gene Location: 6601-6774 bp Feature: gene Location: 6805-7908 bp Feature: domain Description: PleD Location: 7153-7666 bp Feature: domain Description: PleD Location: 7153-7666 bp Feature: domain Description: PleD Location: 7702-7840 bp Feature: domain Description: PleD Location: 7702-784 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT