myRT

myRT report for GCA_902362675.1_MGYG-HGUT-00054

Download annotations/find similar RTs

Seq: CABIXU010000006.1 (136296 bp)
Overview 1 RT 1: 105787-109735 bp Neighborhood of RT #1 [105787, 109735] RVT-DGRs Feature: gene Location: 105787-106083 bp Feature: gene Location: 106086-107447 bp Feature: gene Location: 107780-108967 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 108113-108740 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 081 1 3-1 08740 bp Feature: gene Location: 108930-109358 bp Feature: gene Location: 109355-109735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABIXU010000010.1 (116085 bp)
Overview 1 RT 1: 61936-65699 bp 2 RT 2: 82693-86726 bp Neighborhood of RT #1 [61936, 65770] RVT-DGRs Phage_holin_4_1 Neighborhood of RT #2 [82693, 86746] TraO Bac_Flav_CT_N RVT-GII Intron_maturas2 Bac_Flav_CT_N Feature: gene Location: 61936-63270 bp Feature: gene Location: 63314-63658 bp Feature: gene Location: 63915-64949 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 64125-64737 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6412 5-64737 bp Feature: gene Location: 64927-65298 bp Feature: gene Location: 65300-65770 bp Feature: domain Description: Phage_holin_4_1 Location: 65387-65699 bp Feature: domain Description: Phage_holin_4_1 Location: 65387-65699 bp Feature: gene Location: 82693-83268 bp Feature: domain Description: TraO Location: 82768-83263 bp Feature: domain Description: TraO Location: 82 768-832 63 bp Feature: gene Location: 83271-83978 bp Feature: domain Description: Bac_Flav_CT_N Location: 83394-83955 bp Feature: domain Description: Bac_Flav_CT_N Location: 83394-83955 bp Feature: gene Location: 83968-85779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84232-85054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 842 32 -85054 bp Feature: domain Description: Intron_maturas2 Location: 85126-85435 bp Feature: domain Description: Intron_maturas2 Location: 8512 6-85435 bp Feature: gene Location: 85814-86302 bp Feature: gene Location: 86321-86746 bp Feature: domain Description: Bac_Flav_CT_N Location: 86324-86726 bp Feature: domain Description: Bac_Flav_CT_N Location: 8632 4-8672 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABIXU010000018.1 (75712 bp)
Overview 1 RT 1: 50321-55001 bp Neighborhood of RT #1 [50321, 55001] RVT-DGRs Feature: gene Location: 50321-51790 bp Feature: gene Location: 51981-52166 bp Feature: gene Location: 52288-53631 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 52495-53086 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 52495-53 086 bp Feature: gene Location: 53641-54015 bp Feature: gene Location: 54249-55001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABIXU010000056.1 (31622 bp)
Overview 1 RT 1: 2-1236 bp Neighborhood of RT #1 [2, 1236] RVT-DGRs Feature: gene Location: 2-646 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 23-326 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 23-326 bp Feature: gene Location: 588-980 bp Feature: gene Location: 865-1236 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABIXU010000062.1 (27406 bp)
Overview 1 RT 1: 25079-27178 bp Neighborhood of RT #1 [25079, 27288] RVT-GII GIIM Feature: gene Location: 25079-25228 bp Feature: gene Location: 25408-25545 bp Feature: gene Location: 26020-27288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26233-26890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26233-26890 bp Feature: domain Description: GIIM Note: maturase Location: 26971-27178 bp Feature: domain Description: GIIM Note: maturase Location: 26971-27178 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABIXU010000008.1 (124262 bp)
Overview 1 RT 1: 40349-47424 bp Neighborhood of RT #1 [40349, 47963] DUF4326 TraG-D_C RVT_N RVT-GII GIIM RVT_N RVT-GII GIIM YWFCY Feature: gene Location: 40349-40882 bp Feature: domain Description: DUF4326 Location: 40364-40619 bp Feature: domain Description: DUF4326 Location: 4036 4-406 19 bp Feature: gene Location: 41100-42326 bp Feature: domain Description: TraG-D_C Location: 41682-42015 bp Feature: domain Description: TraG-D_C Location: 416 82-42015 bp Feature: gene Location: 42331-43983 bp Feature: domain Description: RVT_N Location: 42385-42628 bp Feature: domain Description: RVT_N Location: 42385-426 28 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42673-43321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426 73-43321 bp Feature: domain Description: GIIM Note: maturase Location: 43375-43606 bp Feature: domain Description: GIIM Note: maturase Location: 43375-436 06 bp Feature: gene Location: 44149-44283 bp Feature: gene Location: 44301-44450 bp Feature: gene Location: 44621-44941 bp Feature: gene Location: 44922-46625 bp Feature: domain Description: RVT_N Location: 44994-45231 bp Feature: domain Description: RVT_N Location: 44994-45231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45282-45936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45282-45936 bp Feature: domain Description: GIIM Note: maturase Location: 45987-46221 bp Feature: domain Description: GIIM Note: maturase Location: 45987-46 221 bp Feature: gene Location: 46857-47084 bp Feature: gene Location: 47241-47963 bp Feature: domain Description: YWFCY Location: 47247-47424 bp Feature: domain Description: YWFCY Location: 47247-47424 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABIXU010000114.1 (8919 bp)
Overview 1 RT 1: 542-3740 bp Neighborhood of RT #1 [542, 3740] RVT-GII GIIM CcmA Feature: gene Location: 542-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 52-1409 bp Feature: domain Description: GIIM Note: maturase Location: 1487-1694 bp Feature: domain Description: GIIM Note: maturase Location: 1487 -1694 bp Feature: gene Location: 1845-2903 bp Feature: domain Description: CcmA Location: 2061-2811 bp Feature: domain Description: CcmA Location: 2061-2811 bp Feature: gene Location: 2910-3740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABIXU010000155.1 (1368 bp)
Overview 1 RT 1: 253-1115 bp Neighborhood of RT #1 [253, 1246] group_II_RT_mat RVT-GII Feature: gene Location: 253-465 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 331-454 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 331-454 bp Feature: gene Location: 458-1246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 500-1115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 500-1115 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABIXU010000081.1 (19348 bp)
Overview 1 RT 1: 9657-19222 bp Neighborhood of RT #1 [9657, 19227] rpoB PRK00566 RVT-GII Feature: gene Location: 9657-13469 bp Feature: domain Description: rpoB Location: 9678-13464 bp Feature: domain Description: rpoB Location: 9 678-13464 bp Feature: gene Location: 13575-17858 bp Feature: domain Description: PRK00566 Location: 13596-17817 bp Feature: domain Description: PRK00566 Location: 1359 6-17817 bp Feature: gene Location: 18334-19227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18658-19222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18658-19 222 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABIXU010000016.1 (85852 bp)
Overview 1 RT 1: 77703-81235 bp Neighborhood of RT #1 [77703, 81235] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 77703-78512 bp Feature: domain Description: DUF1566 Location: 78234-78483 bp Feature: domain Description: DUF1566 Location: 78234-78483 bp Feature: gene Location: 78659-79066 bp Feature: domain Description: Avd_like Location: 78692-79001 bp Feature: domain Description: Avd_like Location: 78692-79001 bp Feature: gene Location: 79081-80502 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 79456-80158 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 79456-80158 bp Feature: gene Location: 80465-80743 bp Feature: gene Location: 80942-81235 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABIXU010000111.1 (9803 bp)
Overview 1 RT 1: 1-6248 bp Neighborhood of RT #1 [1, 6259] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 1-270 bp Feature: gene Location: 212-1624 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 602-1304 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 602-1304 bp Feature: gene Location: 1632-1988 bp Feature: domain Description: Avd_like Location: 1659-1968 bp Feature: domain Description: Avd_like Location: 1659-1968 bp Feature: gene Location: 2030-6259 bp Feature: domain Description: DUF1566 Location: 5990-6248 bp Feature: domain Description: DUF1566 Location: 5990-6248 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT