myRT

myRT report for GCA_902363595.1_MGYG-HGUT-00126

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Seq: CABJAP010000003.1 (313331 bp)
Overview 1 RT 1: 56726-62290 bp 2 RT 2: 257090-264386 bp Neighborhood of RT #1 [56726, 62637] PRK07726 Toprim_Crpt RVT-GII GIIM DUF3795 Neighborhood of RT #2 [257090, 264469] Y2_Tnp RVT_N RVT-GII Recombinase Zn_ribbon_recom Recombinase HTH_17 PinE DUF5372 RVT-GII GIIM Zn_Tnp_IS91 Y2_Tnp recomb_XerD Feature: gene Location: 56726-58849 bp Feature: domain Description: PRK07726 Location: 56744-58628 bp Feature: domain Description: PRK07726 Location: 56744-58628 bp Feature: domain Description: Toprim_Crpt Location: 58655-58814 bp Feature: domain Description: Toprim_Crpt Location: 58655-5881 4 bp Feature: gene Location: 58888-59946 bp Feature: gene Location: 60140-61501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60422-61037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60422-61 037 bp Feature: domain Description: GIIM Note: maturase Location: 61097-61328 bp Feature: domain Description: GIIM Note: maturase Location: 61 097-61 328 bp Feature: gene Location: 61729-62037 bp Feature: gene Location: 62086-62637 bp Feature: domain Description: DUF3795 Location: 62119-62290 bp Feature: domain Description: DUF3795 Location: 621 1 9-62290 bp Feature: gene Location: 257090-257563 bp Feature: domain Description: Y2_Tnp Location: 257102-257384 bp Feature: domain Description: Y2_Tnp Location: 2571 02-257384 bp Feature: gene Location: 257857-258048 bp Feature: gene Location: 258157-258591 bp Feature: domain Description: RVT_N Location: 258202-258445 bp Feature: domain Description: RVT_N Location: 258202-258445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258490-258538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258490-258538 bp Feature: gene Location: 258618-260090 bp Feature: domain Description: Recombinase Location: 258636-259005 bp Feature: domain Description: Recombinase Location: 258636-259005 bp Feature: domain Description: Zn_ribbon_recom Location: 259059-259233 bp Feature: domain Description: Zn_ribbon_recom Location: 259059-259233 bp Feature: domain Description: Recombinase Location: 259761-259878 bp Feature: domain Description: Recombinase Location: 259761 -259878 bp Feature: domain Description: HTH_17 Location: 259932-260022 bp Feature: domain Description: HTH_1 7 Location: 259932-260022 bp Feature: gene Location: 260110-260664 bp Feature: domain Description: PinE Location: 260173-260632 bp Feature: domain Description: PinE Location: 2601 73-260632 bp Feature: gene Location: 260794-261153 bp Feature: gene Location: 261210-261515 bp Feature: domain Description: DUF5372 Location: 261297-261504 bp Feature: domain Description: DUF5372 Location: 261 297-261 504 bp Feature: gene Location: 261491-262780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261494-262097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261 494-262097 bp Feature: domain Description: GIIM Note: maturase Location: 262151-262385 bp Feature: domain Description: GIIM Note: maturase Location: 2621 51 -262385 bp Feature: gene Location: 262885-263589 bp Feature: domain Description: Zn_Tnp_IS91 Location: 262915-263182 bp Feature: domain Description: Zn_Tnp_IS91 Location: 26291 5-2631 82 bp Feature: domain Description: Y2_Tnp Location: 263308-263566 bp Feature: domain Description: Y2_Tnp Location: 263308-263566 bp Feature: gene Location: 263582-264469 bp Feature: domain Description: recomb_XerD Location: 263594-264386 bp Feature: domain Description: recomb_XerD Location: 263594-264386 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABJAP010000011.1 (167152 bp)
Overview 1 RT 1: 4705-10433 bp Neighborhood of RT #1 [4705, 10582] RVT-GII GIIM RVT-GII PRK09975 TetR_C_8 DEDD_Tnp_IS110 COG3547 Feature: gene Location: 4705-4836 bp Feature: gene Location: 4843-5133 bp Feature: gene Location: 5206-6450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5410-6067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5410-6067 bp Feature: domain Description: GIIM Note: maturase Location: 6148-6364 bp Feature: domain Description: GIIM Note: maturase Location: 6148-6364 bp Feature: gene Location: 6964-7779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7276-7753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 76-7753 bp Feature: gene Location: 8280-8840 bp Feature: domain Description: PRK09975 Location: 8304-8466 bp Feature: domain Description: PRK09975 Location: 8304-8466 bp Feature: domain Description: TetR_C_8 Location: 8529-8811 bp Feature: domain Description: TetR_C_8 Location: 852 9-8811 bp Feature: gene Location: 9380-10582 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 9392-9863 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 9392 -9863 bp Feature: domain Description: COG3547 Location: 10115-10433 bp Feature: domain Description: COG3547 Location: 10115-10433 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABJAP010000006.1 (278760 bp)
Overview 1 RT 1: 130127-132921 bp Neighborhood of RT #1 [130127, 133334] ArgA RVT-Retrons DUF1002 Feature: gene Location: 130127-130267 bp Feature: gene Location: 130272-130712 bp Feature: domain Description: ArgA Location: 130425-130644 bp Feature: domain Description: ArgA Location: 13 0425-13 0644 bp Feature: gene Location: 130699-131700 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 130867-131419 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13 0867-13 1419 bp Feature: gene Location: 131800-131988 bp Feature: gene Location: 132165-133334 bp Feature: domain Description: DUF1002 Location: 132270-132921 bp Feature: domain Description: DUF1002 Location: 13 2270-13 2921 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT