myRT

myRT report for GCA_902363675.1_MGYG-HGUT-00136

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Seq: CABJAV010000102.1 (1889 bp)
Overview 1 RT 1: 78-1887 bp Neighborhood of RT #1 [78, 1887] RVT-GII GIIM Feature: gene Location: 78-1382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 279-897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 279-897 bp Feature: domain Description: GIIM Note: maturase Location: 951-1167 bp Feature: domain Description: GIIM Note: maturase Location: 951 -1 1 67 bp Feature: gene Location: 1738-1887 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CABJAV010000002.1 (394708 bp)
Overview 1 RT 1: 100939-107571 bp Neighborhood of RT #1 [100939, 108377] ERI-1_3'hExo_like RVT-UG5 nitrilase Methyltransf_25 SSL2 Feature: gene Location: 100939-101589 bp Feature: domain Description: ERI-1_3'hExo_like Location: 100948-101479 bp Feature: domain Description: ERI-1_3'hExo_like Location: 100948-101479 bp Feature: gene Location: 101623-102057 bp Feature: gene Location: 102263-105286 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 102719-103211 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 102 719-1032 11 bp Feature: domain Description: nitrilase Location: 104531-105176 bp Feature: domain Description: nitrilase Location: 104531-105176 bp Feature: gene Location: 105279-105872 bp Feature: domain Description: Methyltransf_25 Location: 105408-105672 bp Feature: domain Description: Methyltransf_2 5 Location: 105408-105672 bp Feature: gene Location: 105876-108377 bp Feature: domain Description: SSL2 Location: 106575-107571 bp Feature: domain Description: SSL2 Location: 106575-107571 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ERI-1_3'hExo_like (cd06133), RVT-UG5, nitrilase (cl11424), Methyltransf_25 (pfam13649), SSL2 (COG1061)

Seq: CABJAV010000009.1 (103912 bp)
Overview 1 RT 1: 96815-102874 bp Neighborhood of RT #1 [96815, 102876] T_den_put_tspse T_den_put_tspse T_den_put_tspse RVT-GII RVT-GII GIIM Transposase_31 fliH FlgL FlgL Feature: gene Location: 96815-97576 bp Feature: domain Description: T_den_put_tspse Location: 96923-97034 bp Feature: domain Description: T_den_put_tspse Location: 96923 -9703 4 bp Feature: domain Description: T_den_put_tspse Location: 97106-97355 bp Feature: domain Description: T_den_put_tspse Location: 97106-973 55 bp Feature: domain Description: T_den_put_tspse Location: 97397-97523 bp Feature: domain Description: T_den_put_tspse Location: 973 97-97523 bp Feature: gene Location: 97999-98142 bp Feature: gene Location: 98129-98710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98339-98708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 983 3 9-98708 bp Feature: gene Location: 98744-99409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98747-98954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98747-98954 bp Feature: domain Description: GIIM Note: maturase Location: 99017-99245 bp Feature: domain Description: GIIM Note: maturase Location: 99017-99245 bp Feature: gene Location: 99891-100886 bp Feature: domain Description: Transposase_31 Location: 100080-100476 bp Feature: domain Description: Transposase_3 1 Location: 100080-100476 bp Feature: domain Description: fliH Location: 100632-100779 bp Feature: domain Description: fliH Location: 10063 2-100779 bp Feature: gene Location: 100981-102876 bp Feature: domain Description: FlgL Location: 100984-101857 bp Feature: domain Description: FlgL Location: 100984-101857 bp Feature: domain Description: FlgL Location: 101977-102874 bp Feature: domain Description: FlgL Location: 101977-102874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T_den_put_tspse (TIGR01784), RVT-GII, GIIM (pfam08388), Transposase_31 (pfam04754), fliH (PRK13386), FlgL (COG1344)

Seq: CABJAV010000001.1 (477473 bp)
Overview 1 RT 1: 268554-271518 bp Neighborhood of RT #1 [268554, 271553] RVT-GII OmpR CcmA Feature: gene Location: 268554-268682 bp Feature: gene Location: 268812-269054 bp Feature: gene Location: 269060-269719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 269411-269696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2694 11-269696 bp Feature: gene Location: 269827-270513 bp Feature: domain Description: OmpR Location: 269836-270502 bp Feature: domain Description: OmpR Location: 269836-270502 bp Feature: gene Location: 270615-271553 bp Feature: domain Description: CcmA Location: 270630-271518 bp Feature: domain Description: CcmA Location: 270630-271518 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, OmpR (COG0745), CcmA (COG4133)

Seq: CABJAV010000017.1 (66218 bp)
Overview 1 RT 1: 60393-65261 bp Neighborhood of RT #1 [60393, 65269] BDH RVT-GII GIIM RVT-GII COG3943 DUF1524 COG3586 Feature: gene Location: 60393-61550 bp Feature: domain Description: BDH Location: 60402-61539 bp Feature: domain Description: BDH Location: 60402-615 39 bp Feature: gene Location: 61817-62014 bp Feature: gene Location: 62194-62757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62200-62305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62200-62305 bp Feature: domain Description: GIIM Note: maturase Location: 62362-62581 bp Feature: domain Description: GIIM Note: maturase Location: 62362-625 81 bp Feature: gene Location: 62835-63299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63153-63261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6315 3-63261 bp Feature: gene Location: 63685-64542 bp Feature: domain Description: COG3943 Location: 63745-64516 bp Feature: domain Description: COG3943 Location: 63745 -645 16 bp Feature: gene Location: 64574-65269 bp Feature: domain Description: DUF1524 Location: 64577-64838 bp Feature: domain Description: DUF15 24 Location: 645 77-64838 bp Feature: domain Description: COG3586 Location: 64964-65261 bp Feature: domain Description: COG35 86 Location: 64964-65 261 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BDH (cd08187), RVT-GII, GIIM (pfam08388), COG3943 (Uncharacterized conserved protein ), DUF1524 (pfam07510), COG3586 (Predicted transport protein )