myRT

myRT report for GCA_902363705.1_MGYG-HGUT-00149

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Seq: CABJBI010000067.1 (13881 bp)
Overview 1 RT 1: 8893-11558 bp Neighborhood of RT #1 [8893, 11572] LplB GIIM RVT-GII UgpB PBP2_TMBP_like Feature: gene Location: 8893-9885 bp Feature: domain Description: LplB Location: 8983-9859 bp Feature: domain Description: LplB Location: 8983-9859 bp Feature: gene Location: 10406-10549 bp Feature: domain Description: GIIM Note: maturase Location: 10409-10547 bp Feature: domain Description: GIIM Note: maturase Location: 1 0409-1 0547 bp Feature: gene Location: 10587-10934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10740-10926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0740-1 0926 bp Feature: gene Location: 11099-11329 bp Feature: domain Description: UgpB Location: 11111-11282 bp Feature: domain Description: UgpB Location: 1 1 1 1 1 -1 1 282 bp Feature: gene Location: 11378-11572 bp Feature: domain Description: PBP2_TMBP_like Location: 11384-11558 bp Feature: domain Description: PBP2_TMBP_like Location: 1 1 384-1 1 558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LplB (COG4209), GIIM (pfam08388), RVT-GII, UgpB (COG1653), PBP2_TMBP_like (cd13585)

Seq: CABJBI010000159.1 (390 bp)
Overview 1 RT 1: 1-385 bp Neighborhood of RT #1 [1, 387] RVT-GII Feature: gene Location: 1-387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 196-385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 196-385 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CABJBI010000002.1 (193791 bp)
Overview 1 RT 1: 187653-192765 bp Neighborhood of RT #1 [187653, 193556] NucS PLDc_N_DEXD_b3 SSL2 RVT-UG24 HDc Feature: gene Location: 187653-188036 bp Feature: domain Description: NucS Location: 187707-187941 bp Feature: domain Description: NucS Location: 187707-187941 bp Feature: gene Location: 188124-190631 bp Feature: domain Description: PLDc_N_DEXD_b3 Location: 188247-188670 bp Feature: domain Description: PLDc_N_DEXD_b3 Location: 188247-188670 bp Feature: domain Description: SSL2 Location: 188760-190146 bp Feature: domain Description: SSL2 Location: 188760-190146 bp Feature: gene Location: 190650-193556 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 190791-191244 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 190791-191244 bp Feature: domain Description: HDc Location: 192492-192765 bp Feature: domain Description: HDc Location: 192492-192765 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NucS (pfam01939), PLDc_N_DEXD_b3 (cd09205), SSL2 (COG1061), RVT-UG24, HDc (smart00471)

Seq: CABJBI010000024.1 (46745 bp)
Overview 1 RT 1: 11162-19172 bp Neighborhood of RT #1 [11162, 19183] Bacterial_PFK PRK06354 RVT-GII GIIM rumA dCache_1 GGDEF Feature: gene Location: 11162-12121 bp Feature: domain Description: Bacterial_PFK Location: 11168-12113 bp Feature: domain Description: Bacterial_PFK Location: 11168-12113 bp Feature: gene Location: 12189-13601 bp Feature: domain Description: PRK06354 Location: 12192-13596 bp Feature: domain Description: PRK06354 Location: 12192-13596 bp Feature: gene Location: 14071-15474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14416-15034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 4 16-15034 bp Feature: domain Description: GIIM Note: maturase Location: 15085-15319 bp Feature: domain Description: GIIM Note: maturase Location: 15085-15319 bp Feature: gene Location: 15919-17298 bp Feature: domain Description: rumA Location: 15979-17269 bp Feature: domain Description: rumA Location: 15979-17269 bp Feature: gene Location: 17768-19183 bp Feature: domain Description: dCache_1 Location: 17918-18575 bp Feature: domain Description: dCache_1 Location: 17918-18575 bp Feature: domain Description: GGDEF Location: 18728-19172 bp Feature: domain Description: GGDEF Location: 18728-19172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bacterial_PFK (cd00763), PRK06354 (pyruvate kinase; Provisional), RVT-GII, GIIM (pfam08388), rumA (TIGR00479), dCache_1 (pfam02743), GGDEF (TIGR00254)

Seq: CABJBI010000145.1 (563 bp)
Overview 1 RT 1: 3-555 bp Neighborhood of RT #1 [3, 560] RVT-GII Feature: gene Location: 3-560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 204-555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 204-5 5 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII