myRT

myRT report for GCA_902363795.1_MGYG-HGUT-00150

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Seq: CABJBJ010000074.1 (8042 bp)
Overview 1 RT 1: 811-7452 bp Neighborhood of RT #1 [811, 7571] RVT-GII VirD4 RpsA Feature: gene Location: 811-1920 bp Feature: gene Location: 2025-2555 bp Feature: gene Location: 3252-5078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3552-4251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3552-4251 bp Feature: gene Location: 5203-6540 bp Feature: domain Description: VirD4 Location: 5206-6337 bp Feature: domain Description: VirD4 Location: 5206-6337 bp Feature: gene Location: 6597-7571 bp Feature: domain Description: RpsA Location: 6738-7452 bp Feature: domain Description: RpsA Location: 6738-7452 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABJBJ010000008.1 (242625 bp)
Overview 1 RT 1: 151192-158058 bp Neighborhood of RT #1 [151192, 158087] PurR GDE_N GDE_C RVT-Retrons PRK14806 PRK06545 Feature: gene Location: 151192-152181 bp Feature: domain Description: PurR Location: 151201-152152 bp Feature: domain Description: PurR Location: 1512 01-152 152 bp Feature: gene Location: 152207-154186 bp Feature: domain Description: GDE_N Location: 152270-152900 bp Feature: domain Description: GDE_N Location: 152 2 70-152 900 bp Feature: domain Description: GDE_C Location: 153056-154151 bp Feature: domain Description: GDE_C Location: 153056-154151 bp Feature: gene Location: 154565-155578 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 154730-155285 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 154730-1552 85 bp Feature: gene Location: 155693-156970 bp Feature: domain Description: PRK14806 Location: 155705-156947 bp Feature: domain Description: PRK14806 Location: 155705-156947 bp Feature: gene Location: 156987-158087 bp Feature: domain Description: PRK06545 Location: 157002-158058 bp Feature: domain Description: PRK06545 Location: 157002 -158058 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABJBJ010000036.1 (72405 bp)
Overview 1 RT 1: 50193-56066 bp Neighborhood of RT #1 [50193, 56068] Hit RVT-GII GIIM RVT-GII GIIM Integrase_DNA Phage_int_SAM_5 INT_ICEBs1_C_like Tn916-Xis Feature: gene Location: 50193-50411 bp Feature: domain Description: Hit Location: 50199-50403 bp Feature: domain Description: Hit Location: 50199-50403 bp Feature: gene Location: 50735-50926 bp Feature: gene Location: 51347-52663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51593-52208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51593 -52208 bp Feature: domain Description: GIIM Note: maturase Location: 52268-52499 bp Feature: domain Description: GIIM Note: maturase Location: 52268-52499 bp Feature: gene Location: 52816-52947 bp Feature: gene Location: 53162-54349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53477-54104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53 477-54104 bp Feature: domain Description: GIIM Note: maturase Location: 54158-54338 bp Feature: domain Description: GIIM Note: maturase Location: 54158-543 3 8 bp Feature: gene Location: 54518-55729 bp Feature: domain Description: Integrase_DNA Location: 54521-54731 bp Feature: domain Description: Integrase_DNA Location: 54521-5473 1 bp Feature: domain Description: Phage_int_SAM_5 Location: 54782-55040 bp Feature: domain Description: Phage_int_SAM_5 Location: 54782-55040 bp Feature: domain Description: INT_ICEBs1_C_like Location: 55100-55664 bp Feature: domain Description: INT_ICEBs1_C_like Location: 55100-55664 bp Feature: gene Location: 55808-56068 bp Feature: domain Description: Tn916-Xis Location: 55868-56066 bp Feature: domain Description: Tn916-Xis Location: 55868-56066 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABJBJ010000081.1 (4873 bp)
Overview 1 RT 1: 1122-4607 bp Neighborhood of RT #1 [1122, 4720] TraG-D_C Maff2 RVT-GII HNHc Feature: gene Location: 1122-1871 bp Feature: domain Description: TraG-D_C Location: 1299-1650 bp Feature: domain Description: TraG-D_C Location: 1299-1650 bp Feature: gene Location: 1939-2070 bp Feature: domain Description: Maff2 Location: 1942-2068 bp Feature: domain Description: Maff2 Location: 194 2-2068 bp Feature: gene Location: 2801-4720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3173-3911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3173-3911 bp Feature: domain Description: HNHc Note: nucleases Location: 4454-4607 bp Feature: domain Description: HNHc Note: nucleases Location: 4 4 54 -4 607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABJBJ010000019.1 (133873 bp)
Overview 1 RT 1: 62683-65808 bp Neighborhood of RT #1 [62683, 65808] Maff2 TraG-D_C RVT-GII Intron_maturas2 Feature: gene Location: 62683-62898 bp Feature: domain Description: Maff2 Location: 62686-62893 bp Feature: domain Description: Maff2 Location: 62686-62893 bp Feature: gene Location: 62963-63445 bp Feature: domain Description: TraG-D_C Location: 62966-63212 bp Feature: domain Description: TraG-D_C Location: 62966-63212 bp Feature: gene Location: 63636-65447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63900-64731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63900-64731 bp Feature: domain Description: Intron_maturas2 Location: 64800-65127 bp Feature: domain Description: Intron_maturas2 Location: 64800-65 127 bp Feature: gene Location: 65449-65586 bp Feature: gene Location: 65620-65808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABJBJ010000126.1 (1401 bp)
Overview 1 RT 1: 73-1400 bp Neighborhood of RT #1 [73, 1399] RVT-GII Feature: gene Location: 73-213 bp Feature: gene Location: 716-1399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1031-1400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1031-1400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABJBJ010000101.1 (2479 bp)
Overview 1 RT 1: 216-2211 bp Neighborhood of RT #1 [216, 2384] COG3666 DDE_Tnp_1_6 RVT-GII GIIM Feature: gene Location: 216-1619 bp Feature: domain Description: COG3666 Location: 243-687 bp Feature: domain Description: COG3666 Location: 243-687 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1227-1578 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1227 -157 8 bp Feature: gene Location: 1722-2384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1725-1932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17 25-1932 bp Feature: domain Description: GIIM Note: maturase Location: 1992-2211 bp Feature: domain Description: GIIM Note: maturase Location: 1992-2211 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABJBJ010000052.1 (35142 bp)
Overview 1 RT 1: 1-1366 bp Neighborhood of RT #1 [1, 1366] RVT-GII Feature: gene Location: 1-699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 247-628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 247-628 bp Feature: gene Location: 809-940 bp Feature: gene Location: 1211-1366 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABJBJ010000011.1 (196606 bp)
Overview 1 RT 1: 40534-46320 bp 2 RT 2: 86842-97706 bp Neighborhood of RT #1 [40534, 46367] Acetyltransf_10 RVT-GII Intron_maturas2 Peptidase_A24 pilus_cpaB Neighborhood of RT #2 [86842, 97747] YtxK COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 PTZ00461 SpoVG SpoVG Feature: gene Location: 40534-41265 bp Feature: domain Description: Acetyltransf_10 Location: 40918-41257 bp Feature: domain Description: Acetyltransf_10 Location: 409 18-41257 bp Feature: gene Location: 41751-41984 bp Feature: gene Location: 42879-44621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43200-44034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43200-44034 bp Feature: domain Description: Intron_maturas2 Location: 44109-44436 bp Feature: domain Description: Intron_maturas2 Location: 44109 -44436 bp Feature: gene Location: 44973-45380 bp Feature: domain Description: Peptidase_A24 Location: 45003-45285 bp Feature: domain Description: Peptidase_A24 Location: 45003-45285 bp Feature: gene Location: 45570-46367 bp Feature: domain Description: pilus_cpaB Location: 45666-46320 bp Feature: domain Description: pilus_cpaB Location: 45666-46320 bp Feature: gene Location: 86842-87363 bp Feature: gene Location: 87368-93733 bp Feature: domain Description: YtxK Location: 89969-90647 bp Feature: domain Description: YtxK Location: 89 9 69 -9 0647 bp Feature: domain Description: COG4646 Location: 90722-93332 bp Feature: domain Description: COG4646 Location: 9 0722-9 3332 bp Feature: gene Location: 94286-96100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94550-95372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9 4550-9 5372 bp Feature: domain Description: Intron_maturas2 Location: 95444-95870 bp Feature: domain Description: Intron_maturas2 Location: 9 5444-9 5870 bp Feature: domain Description: HNHc Note: nucleases Location: 95927-96071 bp Feature: domain Description: HNHc Note: nucleases Location: 9 59 27-9 6071 bp Feature: gene Location: 96160-97104 bp Feature: domain Description: KOG1000 Location: 96208-96385 bp Feature: domain Description: KOG1000 Location: 9 6208-9 6385 bp Feature: domain Description: PTZ00461 Location: 96661-96919 bp Feature: domain Description: PTZ00461 Location: 9 6661-9 69 19 bp Feature: gene Location: 97124-97747 bp Feature: domain Description: SpoVG Location: 97142-97397 bp Feature: domain Description: SpoVG Location: 9 7142-9 739 7 bp Feature: domain Description: SpoVG Location: 97481-97706 bp Feature: domain Description: SpoVG Location: 9 7481-9 7706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABJBJ010000100.1 (2523 bp)
Overview 1 RT 1: 116-2185 bp Neighborhood of RT #1 [116, 2185] RVT-GII Intron_maturas2 Feature: gene Location: 116-1933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380-1211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380-1211 bp Feature: domain Description: Intron_maturas2 Location: 1283-1589 bp Feature: domain Description: Intron_maturas2 Location: 1283-1589 bp Feature: gene Location: 1991-2185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABJBJ010000023.1 (100680 bp)
Overview 1 RT 1: 4081-7455 bp 2 RT 2: 18207-28981 bp Neighborhood of RT #1 [4081, 7455] SpoVG RVT-GII HNHc Neighborhood of RT #2 [18207, 29634] dnaG DUF3991 Toprim_2 COG4646 KOG1000 RVT-GII HNHc ParB_N_like Feature: gene Location: 4081-4365 bp Feature: domain Description: SpoVG Location: 4108-4333 bp Feature: domain Description: SpoVG Location: 4108-4333 bp Feature: gene Location: 4379-4630 bp Feature: gene Location: 4891-6762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5206-5932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5206-5932 bp Feature: domain Description: HNHc Note: nucleases Location: 6484-6652 bp Feature: domain Description: HNHc Note: nucleases Location: 6484-6652 bp Feature: gene Location: 6841-7098 bp Feature: gene Location: 7306-7455 bp Feature: gene Location: 18207-19220 bp Feature: domain Description: dnaG Location: 18372-18480 bp Feature: domain Description: dnaG Location: 18372-18480 bp Feature: domain Description: DUF3991 Location: 18591-18801 bp Feature: domain Description: DUF3991 Location: 18591-18801 bp Feature: domain Description: Toprim_2 Location: 18849-19029 bp Feature: domain Description: Toprim_2 Location: 18849-19029 bp Feature: gene Location: 19231-23400 bp Feature: domain Description: COG4646 Location: 19396-22090 bp Feature: domain Description: COG4646 Location: 19396-22090 bp Feature: domain Description: KOG1000 Location: 22363-22660 bp Feature: domain Description: KOG1000 Location: 22363-22660 bp Feature: gene Location: 23670-25541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23991-24726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23991-24726 bp Feature: domain Description: HNHc Note: nucleases Location: 25281-25422 bp Feature: domain Description: HNHc Note: nucleases Location: 25281-25422 bp Feature: gene Location: 26220-28511 bp Feature: gene Location: 28543-29634 bp Feature: domain Description: ParB_N_like Location: 28735-28981 bp Feature: domain Description: ParB_N_like Location: 28735-28981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABJBJ010000132.1 (1238 bp)
Overview 1 RT 1: 1-1021 bp Neighborhood of RT #1 [1, 1143] RVT-GII HNHc Feature: gene Location: 1-1143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-331 bp Feature: domain Description: HNHc Note: nucleases Location: 880-1021 bp Feature: domain Description: HNHc Note: nucleases Location: 880-1021 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT