myRT

myRT report for GCA_902364015.1_MGYG-HGUT-00173

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Seq: CABJCF010000001.1 (722619 bp)
Overview 1 RT 1: 619507-625425 bp 2 RT 2: 719838-722461 bp Neighborhood of RT #1 [619507, 625425] MurF RVT-AbiA HEPN_AbiA_CTD MFS_YxiO_like Neighborhood of RT #2 [719838, 722616] SPOB_a HATPase_AgrC-ComD-like RVT-GII GIIM Feature: gene Location: 619507-621078 bp Feature: domain Description: MurF Location: 620023-621055 bp Feature: domain Description: MurF Location: 620023-621 055 bp Feature: gene Location: 621451-621843 bp Feature: gene Location: 621872-623755 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 622232-622760 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 622232-622760 bp Feature: domain Description: HEPN_AbiA_CTD Location: 623357-623747 bp Feature: domain Description: HEPN_AbiA_CTD Location: 623357-623747 bp Feature: gene Location: 623910-625142 bp Feature: domain Description: MFS_YxiO_like Location: 623946-625119 bp Feature: domain Description: MFS_YxiO_like Location: 623946-6251 1 9 bp Feature: gene Location: 625288-625425 bp Feature: gene Location: 719838-720818 bp Feature: domain Description: SPOB_a Location: 720222-720378 bp Feature: domain Description: SPOB_a Location: 720222-720378 bp Feature: domain Description: HATPase_AgrC-ComD-like Location: 720414-720810 bp Feature: domain Description: HATPase_AgrC-ComD-like Location: 72041 4-72081 0 bp Feature: gene Location: 721088-721231 bp Feature: gene Location: 721369-722616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721576-722194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721 576-7221 94 bp Feature: domain Description: GIIM Note: maturase Location: 722242-722461 bp Feature: domain Description: GIIM Note: maturase Location: 722242-722461 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MurF (COG0770), RVT-AbiA, HEPN_AbiA_CTD (pfam18732), MFS_YxiO_like (cd17482), SPOB_a (pfam14689), HATPase_AgrC-ComD-like (cd16935), RVT-GII, GIIM (pfam08388)

Seq: CABJCF010000004.1 (151033 bp)
Overview 1 RT 1: 2-3110 bp 2 RT 2: 15152-20639 bp Neighborhood of RT #1 [2, 3190] Transposase_20 RVT-GII GIIM PLDc_unchar4 Neighborhood of RT #2 [15152, 20665] Dcm HTH_26 RVT-GII GIIM TrmA Gph Feature: gene Location: 2-487 bp Feature: domain Description: Transposase_20 Location: 113-338 bp Feature: domain Description: Transposase_2 0 Location: 113-338 bp Feature: gene Location: 654-2006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 912-1530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 912 -1530 bp Feature: domain Description: GIIM Note: maturase Location: 1584-1797 bp Feature: domain Description: GIIM Note: maturase Location: 1584-1797 bp Feature: gene Location: 2272-2463 bp Feature: gene Location: 2528-3190 bp Feature: domain Description: PLDc_unchar4 Location: 2771-3110 bp Feature: domain Description: PLDc_unchar4 Location: 2 771-3110 bp Feature: gene Location: 15152-16438 bp Feature: domain Description: Dcm Location: 15179-16415 bp Feature: domain Description: Dcm Location: 15179-16415 bp Feature: gene Location: 16451-16633 bp Feature: domain Description: HTH_26 Location: 16454-16601 bp Feature: domain Description: HTH_2 6 Location: 16454-16601 bp Feature: gene Location: 16918-18222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17119-17737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17119-17737 bp Feature: domain Description: GIIM Note: maturase Location: 17791-17998 bp Feature: domain Description: GIIM Note: maturase Location: 17791-17998 bp Feature: gene Location: 18903-20036 bp Feature: domain Description: TrmA Location: 18912-20010 bp Feature: domain Description: TrmA Location: 18912 -2 0010 bp Feature: gene Location: 20033-20665 bp Feature: domain Description: Gph Location: 20036-20639 bp Feature: domain Description: Gph Location: 2 0036-2 0639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_20 (pfam02371), RVT-GII, GIIM (pfam08388), PLDc_unchar4 (cd09132), Dcm (COG0270), HTH_26 (pfam13443), TrmA (COG2265), Gph (COG0546)

Seq: CABJCF010000006.1 (5600 bp)
Overview 1 RT 1: 1-4727 bp Neighborhood of RT #1 [1, 4846] RVT-GII GIIM COG4932 COG4932 CollagenBindB CollagenBindB CollagenBindB CollagenBindB CollagenBindB CollagenBindB Feature: gene Location: 1-1251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208-826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208-826 bp Feature: domain Description: GIIM Note: maturase Location: 874-1093 bp Feature: domain Description: GIIM Note: maturase Location: 874-1093 bp Feature: gene Location: 1389-1532 bp Feature: gene Location: 1835-4846 bp Feature: domain Description: COG4932 Location: 1946-2120 bp Feature: domain Description: COG493 2 Location: 1946-2120 bp Feature: domain Description: COG4932 Location: 2144-3128 bp Feature: domain Description: COG493 2 Location: 2144-3 128 bp Feature: domain Description: CollagenBindB Location: 3137-3386 bp Feature: domain Description: CollagenBindB Location: 3 13 7-3 3 86 bp Feature: domain Description: CollagenBindB Location: 3404-3656 bp Feature: domain Description: CollagenBindB Location: 3 404-3 656 bp Feature: domain Description: CollagenBindB Location: 3674-3920 bp Feature: domain Description: CollagenBindB Location: 3 674-3 920 bp Feature: domain Description: CollagenBindB Location: 3938-4190 bp Feature: domain Description: CollagenBindB Location: 3 93 8-4190 bp Feature: domain Description: CollagenBindB Location: 4208-4457 bp Feature: domain Description: CollagenBindB Location: 4208-4457 bp Feature: domain Description: CollagenBindB Location: 4475-4727 bp Feature: domain Description: CollagenBindB Location: 4475-4727 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG4932 (Uncharacterized surface anchored protein ), CollagenBindB (cl15753)