myRT

myRT report for GCA_902364285.1_MGYG-HGUT-00196

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Seq: CABJDH010000008.1 (274930 bp)
Overview 1 RT 1: 218875-227288 bp Neighborhood of RT #1 [218875, 229084] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-DGRs Laminin_G_3 pfam08757 LRR_AMN1 Feature: gene Location: 218875-220020 bp Feature: domain Description: Arm-DNA-bind_5 Location: 218899-219145 bp Feature: domain Description: Arm-DNA-bind_5 Location: 21 8899-21 91 45 bp Feature: domain Description: Phage_int_SAM_5 Location: 219184-219469 bp Feature: domain Description: Phage_int_SAM_5 Location: 21 91 84-21 9469 bp Feature: domain Description: INTN1_C_like Location: 219508-219982 bp Feature: domain Description: INTN1 _C_like Location: 21 9508-21 9982 bp Feature: gene Location: 220072-220566 bp Feature: gene Location: 220568-221923 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 220844-221435 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 220844-221 435 bp Feature: gene Location: 222068-222235 bp Feature: gene Location: 222296-229084 bp Feature: domain Description: Laminin_G_3 Location: 224732-225113 bp Feature: domain Description: Laminin_G_3 Location: 224732-2251 1 3 bp Feature: domain Description: pfam08757 Location: 225908-226232 bp Feature: domain Description: pfam08757 Location: 225908-226232 bp Feature: domain Description: LRR_AMN1 Location: 226844-227288 bp Feature: domain Description: LRR_AMN1 Location: 226844-227288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABJDH010000009.1 (261745 bp)
Overview 1 RT 1: 25682-29614 bp Neighborhood of RT #1 [25682, 29614] RVT-GII Intron_maturas2 Toprim_2 Feature: gene Location: 25682-25864 bp Feature: gene Location: 26106-26279 bp Feature: gene Location: 26409-28217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26673-27495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6673-2 7495 bp Feature: domain Description: Intron_maturas2 Location: 27591-27876 bp Feature: domain Description: Intron_maturas2 Location: 2 7591-2 7876 bp Feature: gene Location: 28207-29127 bp Feature: domain Description: Toprim_2 Location: 28741-29020 bp Feature: domain Description: Toprim_2 Location: 2 8741-2 902 0 bp Feature: gene Location: 29156-29614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABJDH010000010.1 (255956 bp)
Overview 1 RT 1: 209903-212907 bp Neighborhood of RT #1 [209903, 212918] RVT-GII RVT-GII GIIM BACON Feature: gene Location: 209903-210031 bp Feature: gene Location: 210100-210345 bp Feature: gene Location: 210635-211123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 210971-211109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 210971-211109 bp Feature: gene Location: 211126-211815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 211147-211546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 211147-211546 bp Feature: domain Description: GIIM Note: maturase Location: 211561-211792 bp Feature: domain Description: GIIM Note: maturase Location: 211561-211792 bp Feature: gene Location: 211915-212172 bp Feature: gene Location: 212523-212918 bp Feature: domain Description: BACON Location: 212628-212907 bp Feature: domain Description: BACON Location: 212628-212907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABJDH010000001.1 (471582 bp)
Overview 1 RT 1: 152906-156895 bp Neighborhood of RT #1 [152906, 156903] PRK00529 RVT-GII ALP Feature: gene Location: 152906-153472 bp Feature: domain Description: PRK00529 Location: 152909-153467 bp Feature: domain Description: PRK00529 Location: 152909-1534 67 bp Feature: gene Location: 153587-153859 bp Feature: gene Location: 154028-154990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154364-154979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154 364 -154 979 bp Feature: gene Location: 155210-155470 bp Feature: gene Location: 155500-156903 bp Feature: domain Description: ALP Location: 155569-156895 bp Feature: domain Description: ALP Location: 155569-156895 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABJDH010000002.1 (470203 bp)
Overview 1 RT 1: 260478-272319 bp Neighborhood of RT #1 [260478, 272435] RVT-Retrons DUF4011 DEXXQc_SF1 DEXXQc_SF1 SF1_C_Upf1 MTES_1575 DUF3320 rpsA Feature: gene Location: 260478-260678 bp Feature: gene Location: 261080-263266 bp Feature: gene Location: 263472-264605 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 263796-264348 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 263796-264348 bp Feature: gene Location: 264639-270467 bp Feature: domain Description: DUF4011 Location: 265794-266307 bp Feature: domain Description: DUF4011 Location: 265 794-266307 bp Feature: domain Description: DEXXQc_SF1 Location: 266646-267237 bp Feature: domain Description: DEXXQc_SF1 Location: 266646-267237 bp Feature: domain Description: DEXXQc_SF1 Location: 268083-268833 bp Feature: domain Description: DEXXQc_SF1 Location: 268083-268833 bp Feature: domain Description: SF1_C_Upf1 Location: 268842-269355 bp Feature: domain Description: SF1_C_Upf1 Location: 268842-26935 5 bp Feature: domain Description: MTES_1575 Location: 269505-269793 bp Feature: domain Description: MTES_15 75 Location: 2695 05 -269793 bp Feature: domain Description: DUF3320 Location: 269973-270117 bp Feature: domain Description: DUF3320 Location: 269973-270117 bp Feature: gene Location: 270636-272435 bp Feature: domain Description: rpsA Location: 270705-272319 bp Feature: domain Description: rpsA Location: 270705 -272319 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT