myRT

myRT report for GCA_902364745.1_MGYG-HGUT-00244

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Seq: CABJFC010000008.1 (57048 bp)
Overview 1 RT 1: 54629-56809 bp Neighborhood of RT #1 [54629, 57045] ksgA NiaR RVT-GII GIIM GIIM Feature: gene Location: 54629-55447 bp Feature: domain Description: ksgA Location: 54656-55436 bp Feature: domain Description: ksgA Location: 54656-55436 bp Feature: gene Location: 55526-56029 bp Feature: domain Description: NiaR Location: 55538-56024 bp Feature: domain Description: NiaR Location: 55538-56024 bp Feature: gene Location: 56251-57045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56254-56464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56254-56464 bp Feature: domain Description: GIIM Note: maturase Location: 56542-56680 bp Feature: domain Description: GIIM Note: maturase Location: 56542-56680 bp Feature: domain Description: GIIM Note: maturase Location: 56719-56809 bp Feature: domain Description: GIIM Note: maturase Location: 5671 9-56809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ksgA (TIGR00755), NiaR (COG1827), RVT-GII, GIIM (pfam08388)

Seq: CABJFC010000014.1 (40806 bp)
Overview 1 RT 1: 38399-40561 bp Neighborhood of RT #1 [38399, 40803] HAD_BPGM-like Tdk RVT-GII GIIM GIIM Feature: gene Location: 38399-39043 bp Feature: domain Description: HAD_BPGM-like Location: 38411-38960 bp Feature: domain Description: HAD_BPGM-like Location: 38411-38960 bp Feature: gene Location: 39169-39798 bp Feature: domain Description: Tdk Location: 39190-39754 bp Feature: domain Description: Tdk Location: 39190-39754 bp Feature: gene Location: 39895-40803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39901-40228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39901-402 2 8 bp Feature: domain Description: GIIM Note: maturase Location: 40300-40438 bp Feature: domain Description: GIIM Note: maturase Location: 40300-40438 bp Feature: domain Description: GIIM Note: maturase Location: 40480-40561 bp Feature: domain Description: GIIM Note: maturase Location: 40480-40561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HAD_BPGM-like (cd16423), Tdk (COG1435), RVT-GII, GIIM (pfam08388)

Seq: CABJFC010000012.1 (44567 bp)
Overview 1 RT 1: 40567-44564 bp Neighborhood of RT #1 [40567, 44564] MetP metN RVT-GII GIIM Feature: gene Location: 40567-41238 bp Feature: domain Description: MetP Location: 40615-41233 bp Feature: domain Description: MetP Location: 40615-4123 3 bp Feature: gene Location: 41228-42265 bp Feature: domain Description: metN Location: 41231-42254 bp Feature: domain Description: metN Location: 4123 1-42254 bp Feature: gene Location: 42753-44054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42984-43599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42984-43 599 bp Feature: domain Description: GIIM Note: maturase Location: 43662-43890 bp Feature: domain Description: GIIM Note: maturase Location: 43 662-43 890 bp Feature: gene Location: 44406-44564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MetP (COG2011), metN (PRK11153), RVT-GII, GIIM (pfam08388)

Seq: CABJFC010000033.1 (25657 bp)
Overview 1 RT 1: 17912-25064 bp Neighborhood of RT #1 [17912, 25117] PRK13977 RVT-GII GIIM Phage_int_SAM_5 INT_RitC_C_like INT_RitB_C_like INT_RitA_C_like RVT-GII Feature: gene Location: 17912-19705 bp Feature: domain Description: PRK13977 Location: 17915-19697 bp Feature: domain Description: PRK13977 Location: 17915-19697 bp Feature: gene Location: 19787-20020 bp Feature: gene Location: 20547-21029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20553-20736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20553-20736 bp Feature: domain Description: GIIM Note: maturase Location: 20796-20928 bp Feature: domain Description: GIIM Note: maturase Location: 20796-20928 bp Feature: gene Location: 21174-22037 bp Feature: domain Description: Phage_int_SAM_5 Location: 21189-21315 bp Feature: domain Description: Phage_int_SAM_5 Location: 21189-21315 bp Feature: domain Description: INT_RitC_C_like Location: 21405-21954 bp Feature: domain Description: INT_RitC_C_like Location: 214 05-21954 bp Feature: gene Location: 22168-23136 bp Feature: domain Description: INT_RitB_C_like Location: 22495-23080 bp Feature: domain Description: INT_RitB_C_like Location: 224 95-23080 bp Feature: gene Location: 23123-24145 bp Feature: domain Description: INT_RitA_C_like Location: 23564-24107 bp Feature: domain Description: INT_RitA_C_like Location: 23564 -24 107 bp Feature: gene Location: 24157-24375 bp Feature: gene Location: 24479-25117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24680-25064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24 680-25064 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13977 (myosin-cross-reactive antigen; Provisional), RVT-GII, GIIM (pfam08388), Phage_int_SAM_5 (pfam13102), INT_RitC_C_like (cd01182), INT_RitB_C_like (cd00797), INT_RitA_C_like (cd01188)