myRT

myRT report for GCA_902373755.1_MGYG-HGUT-01306

Download annotations/find similar RTs

Seq: CABKNL010000005.1 (144193 bp)
Overview 1 RT 1: 3-2377 bp Neighborhood of RT #1 [3, 2385] RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 3-1409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 345-963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 345-963 bp Feature: domain Description: GIIM Note: maturase Location: 1020-1227 bp Feature: domain Description: GIIM Note: maturase Location: 1 020-1 227 bp Feature: gene Location: 1593-1769 bp Feature: gene Location: 1882-2385 bp Feature: domain Description: DDE_Tnp_1 Location: 1906-2377 bp Feature: domain Description: DDE_Tnp_1 Location: 1 906-2377 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609)

Seq: CABKNL010000004.1 (16060 bp)
Overview 1 RT 1: 12709-15802 bp Neighborhood of RT #1 [12709, 15984] NUC1 RVT-GII GIIM Feature: gene Location: 12709-13596 bp Feature: domain Description: NUC1 Location: 12910-13579 bp Feature: domain Description: NUC1 Location: 12 910-13579 bp Feature: gene Location: 14201-14494 bp Feature: gene Location: 14875-15984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14920-15538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1492 0-15538 bp Feature: domain Description: GIIM Note: maturase Location: 15595-15802 bp Feature: domain Description: GIIM Note: maturase Location: 15595-15802 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NUC1 (COG1864), RVT-GII, GIIM (pfam08388)

Seq: CABKNL010000089.1 (101435 bp)
Overview 1 RT 1: 1-3083 bp 2 RT 2: 96857-100636 bp Neighborhood of RT #1 [1, 3088] FldA RVT-GII GIIM RVT-GII rplT Neighborhood of RT #2 [96857, 100636] PRiA4_ORF3 miaA RVT-GII GIIM Feature: gene Location: 1-336 bp Feature: domain Description: FldA Location: 7-301 bp Feature: domain Description: FldA Location: 7-3 01 bp Feature: gene Location: 845-1675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 851-1229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 851-1229 bp Feature: domain Description: GIIM Note: maturase Location: 1286-1493 bp Feature: domain Description: GIIM Note: maturase Location: 1286-1493 bp Feature: gene Location: 1699-2253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2041-2218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2041-2218 bp Feature: gene Location: 2437-2613 bp Feature: gene Location: 2738-3088 bp Feature: domain Description: rplT Location: 2747-3083 bp Feature: domain Description: rplT Location: 2747-3 083 bp Feature: gene Location: 96857-97411 bp Feature: domain Description: PRiA4_ORF3 Location: 96884-97283 bp Feature: domain Description: PRiA4_ORF3 Location: 96884-97283 bp Feature: gene Location: 97428-98429 bp Feature: domain Description: miaA Location: 97530-98421 bp Feature: domain Description: miaA Location: 9753 0-98421 bp Feature: gene Location: 98906-99814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98918-99368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98918-993 68 bp Feature: domain Description: GIIM Note: maturase Location: 99425-99632 bp Feature: domain Description: GIIM Note: maturase Location: 99425-9963 2 bp Feature: gene Location: 100072-100233 bp Feature: gene Location: 100466-100636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FldA (COG0716), RVT-GII, GIIM (pfam08388), rplT (PRK05185), PRiA4_ORF3 (pfam07929), miaA (TIGR00174)

Seq: CABKNL010000018.1 (17014 bp)
Overview 1 RT 1: 9074-15630 bp Neighborhood of RT #1 [9074, 15650] COG1453 Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-GII Intron_maturas2 Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like HTH_17 Feature: gene Location: 9074-10042 bp Feature: domain Description: COG1453 Location: 9077-10031 bp Feature: domain Description: COG14 53 Location: 9077-10031 bp Feature: gene Location: 10288-11499 bp Feature: domain Description: Arm-DNA-bind_5 Location: 10357-10603 bp Feature: domain Description: Arm-DNA-bind_5 Location: 10357-10603 bp Feature: domain Description: Phage_int_SAM_5 Location: 10654-10951 bp Feature: domain Description: Phage_int_SAM_5 Location: 10654 -10951 bp Feature: domain Description: INTN1_C_like Location: 11014-11482 bp Feature: domain Description: INTN1_C_like Location: 11014 -114 82 bp Feature: gene Location: 12050-13858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12314-13136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12314 -13136 bp Feature: domain Description: Intron_maturas2 Location: 13262-13514 bp Feature: domain Description: Intron_maturas2 Location: 13262-13514 bp Feature: gene Location: 14069-15289 bp Feature: domain Description: Arm-DNA-bind_5 Location: 14096-14342 bp Feature: domain Description: Arm-DNA-bind_5 Location: 14 096-14 34 2 bp Feature: domain Description: Phage_int_SAM_5 Location: 14435-14681 bp Feature: domain Description: Phage_int_SAM_5 Location: 14 4 35-14 681 bp Feature: domain Description: INTN1_C_like Location: 14738-15212 bp Feature: domain Description: INTN1_C_like Location: 14 738-15212 bp Feature: gene Location: 15357-15650 bp Feature: domain Description: HTH_17 Location: 15486-15630 bp Feature: domain Description: HTH_17 Location: 154 86-15630 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG1453 (Predicted oxidoreductase of the aldo/keto reductase family ), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-GII, Intron_maturas2 (pfam01348), HTH_17 (pfam12728)

Seq: CABKNL010000076.1 (104670 bp)
Overview 1 RT 1: 47048-55349 bp Neighborhood of RT #1 [47048, 55375] KOG2230 Glyco_hydro_20b GH20_chitobiase-like Fn3_assoc F5_F8_type_C RVT-GII RVT-GII GIIM PRK14823 CAT Feature: gene Location: 47048-49624 bp Feature: domain Description: KOG2230 Location: 47129-49532 bp Feature: domain Description: KOG2230 Location: 47129-495 32 bp Feature: gene Location: 49648-51984 bp Feature: domain Description: Glyco_hydro_20b Location: 49744-50122 bp Feature: domain Description: Glyco_hydro_20b Location: 49744-5 0122 bp Feature: domain Description: GH20_chitobiase-like Location: 50134-51223 bp Feature: domain Description: GH20_chitobiase-like Location: 5 0134-5 1223 bp Feature: domain Description: Fn3_assoc Location: 51352-51481 bp Feature: domain Description: Fn3_assoc Location: 5 135 2-5 1481 bp Feature: domain Description: F5_F8_type_C Location: 51574-51934 bp Feature: domain Description: F5 _F8_type_C Location: 5 15 74-5 1934 bp Feature: gene Location: 52453-52887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52789-52864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 2789-5 2864 bp Feature: gene Location: 53185-53844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53188-53395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 3188-5 3395 bp Feature: domain Description: GIIM Note: maturase Location: 53449-53680 bp Feature: domain Description: GIIM Note: maturase Location: 5 3449-5 3680 bp Feature: gene Location: 54032-54616 bp Feature: domain Description: PRK14823 Location: 54041-54611 bp Feature: domain Description: PRK14823 Location: 5 4041-5 4611 bp Feature: gene Location: 54719-55375 bp Feature: domain Description: CAT Location: 54734-55349 bp Feature: domain Description: CAT Location: 5 4734-5 5 349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG2230 (KOG2230, Predicted beta-mannosidase ), Glyco_hydro_20b (pfam02838), GH20_chitobiase-like (cd06563), Fn3_assoc (pfam13287), F5_F8_type_C (pfam00754), RVT-GII, GIIM (pfam08388), PRK14823 (putative deoxyribonucleoside-triphosphatase; Provisional), CAT (smart01059)

Seq: CABKNL010000014.1 (43005 bp)
Overview 1 RT 1: 2-2370 bp 2 RT 2: 40574-42987 bp Neighborhood of RT #1 [2, 2370] RVT-GII COG3378 Neighborhood of RT #2 [40574, 43004] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-GII Feature: gene Location: 2-667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-485 bp Feature: gene Location: 733-1926 bp Feature: domain Description: COG3378 Location: 1093-1399 bp Feature: domain Description: COG3378 Location: 1093-1399 bp Feature: gene Location: 1939-2370 bp Feature: gene Location: 40574-41737 bp Feature: domain Description: Arm-DNA-bind_5 Location: 40622-40862 bp Feature: domain Description: Arm-DNA-bind_5 Location: 406 22-4086 2 bp Feature: domain Description: Phage_int_SAM_5 Location: 40916-41216 bp Feature: domain Description: Phage_int_SAM_5 Location: 40916 -41216 bp Feature: domain Description: INTN1_C_like Location: 41261-41720 bp Feature: domain Description: INTN1_C_like Location: 4126 1-41720 bp Feature: gene Location: 41926-42054 bp Feature: gene Location: 42288-43004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42552-42987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42552-42987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, COG3378 (Phage- or plasmid-associated DNA primase ), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)

Seq: CABKNL010000010.1 (109182 bp)
Overview 1 RT 1: 60972-63791 bp Neighborhood of RT #1 [60972, 63791] RVT-DGRs Feature: gene Location: 60972-61214 bp Feature: gene Location: 61399-61848 bp Feature: gene Location: 61881-63182 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 62094-62688 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 62094-62688 bp Feature: gene Location: 63279-63536 bp Feature: gene Location: 63558-63791 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: CABKNL010000056.1 (78977 bp)
Overview 1 RT 1: 49894-52836 bp 2 RT 2: 72884-77323 bp Neighborhood of RT #1 [49894, 52836] RVT-GII GIIM Neighborhood of RT #2 [72884, 77323] DUF3408 ParAB_family RVT-GII GIIM Amidoligase_2 Feature: gene Location: 49894-50145 bp Feature: gene Location: 50157-50321 bp Feature: gene Location: 50554-51849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50749-51364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50749-51364 bp Feature: domain Description: GIIM Note: maturase Location: 51436-51649 bp Feature: domain Description: GIIM Note: maturase Location: 51436-51649 bp Feature: gene Location: 52192-52395 bp Feature: gene Location: 52429-52836 bp Feature: gene Location: 72884-73270 bp Feature: domain Description: DUF3408 Location: 73046-73250 bp Feature: domain Description: DUF3408 Location: 73046-73250 bp Feature: gene Location: 73298-74086 bp Feature: domain Description: ParAB_family Location: 73328-73856 bp Feature: domain Description: ParAB_family Location: 73328 -738 56 bp Feature: gene Location: 74523-75929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74865-75483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 748 65-7548 3 bp Feature: domain Description: GIIM Note: maturase Location: 75540-75747 bp Feature: domain Description: GIIM Note: maturase Location: 75540-75747 bp Feature: gene Location: 76164-77093 bp Feature: domain Description: Amidoligase_2 Location: 76380-76977 bp Feature: domain Description: Amidoligase_2 Location: 7638 0-76977 bp Feature: gene Location: 77090-77323 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF3408 (pfam11888), ParAB_family (cd02042), Amidoligase_2 (pfam12224)

Seq: CABKNL010000087.1 (92375 bp)
Overview 1 RT 1: 12801-19192 bp Neighborhood of RT #1 [12801, 19192] terB_like terB_like RVT-DGRs Feature: gene Location: 12801-16907 bp Feature: domain Description: terB_like Location: 15132-15264 bp Feature: domain Description: terB_like Location: 15132-15264 bp Feature: domain Description: terB_like Location: 15333-15624 bp Feature: domain Description: terB_like Location: 15333-15624 bp Feature: gene Location: 17094-17507 bp Feature: gene Location: 17491-18516 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 17701-18304 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 17701-18304 bp Feature: gene Location: 18535-18795 bp Feature: gene Location: 18824-19192 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT terB_like (cl11965), RVT-DGRs

Seq: CABKNL010000033.1 (106353 bp)
Overview 1 RT 1: 8310-13450 bp Neighborhood of RT #1 [8310, 13455] DUF4286 LC_FACL_like RVT-GII GIIM RNase_Z Feature: gene Location: 8310-8615 bp Feature: domain Description: DUF4286 Location: 8319-8607 bp Feature: domain Description: DUF4286 Location: 8319-8607 bp Feature: gene Location: 8710-10434 bp Feature: domain Description: LC_FACL_like Location: 8848-10417 bp Feature: domain Description: LC_FACL_like Location: 8848-10 417 bp Feature: gene Location: 10570-11976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10912-11530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10 912-11530 bp Feature: domain Description: GIIM Note: maturase Location: 11587-11794 bp Feature: domain Description: GIIM Note: maturase Location: 11587-11794 bp Feature: gene Location: 12160-12336 bp Feature: gene Location: 12541-13455 bp Feature: domain Description: RNase_Z Location: 12556-13450 bp Feature: domain Description: RNase_Z Location: 12556-13450 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4286 (pfam14114), LC_FACL_like (cd05914), RVT-GII, GIIM (pfam08388), RNase_Z (TIGR02651)

Seq: CABKNL010000039.1 (58798 bp)
Overview 1 RT 1: 11517-15448 bp Neighborhood of RT #1 [11517, 16428] Imm17 TraG-D_C RVT-GII Intron_maturas2 HNHc YWFCY Feature: gene Location: 11517-11798 bp Feature: domain Description: Imm17 Location: 11607-11784 bp Feature: domain Description: Imm17 Location: 11 607-11 784 bp Feature: gene Location: 11953-12957 bp Feature: domain Description: TraG-D_C Location: 12331-12664 bp Feature: domain Description: TraG-D_C Location: 12331-12664 bp Feature: gene Location: 12921-14738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13188-14010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13188-14010 bp Feature: domain Description: Intron_maturas2 Location: 14160-14388 bp Feature: domain Description: Intron_maturas2 Location: 14160-14388 bp Feature: domain Description: HNHc Note: nucleases Location: 14559-14709 bp Feature: domain Description: HNHc Note: nucleases Location: 14559-14709 bp Feature: gene Location: 14905-15189 bp Feature: gene Location: 15265-16428 bp Feature: domain Description: YWFCY Location: 15271-15448 bp Feature: domain Description: YWFCY Location: 15271-15448 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Imm17 (pfam15562), TraG-D_C (pfam12696), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), YWFCY (pfam14293)

Seq: CABKNL010000059.1 (64960 bp)
Overview 1 RT 1: 21679-28648 bp Neighborhood of RT #1 [21679, 28659] HemN RVT-GII GIIM DDE_Tnp_1 DUF4372 RVT-GII PRK05764 BI-1-like_bacterial Feature: gene Location: 21679-22833 bp Feature: domain Description: HemN Location: 21700-22819 bp Feature: domain Description: HemN Location: 21700-22819 bp Feature: gene Location: 22874-23368 bp Feature: gene Location: 23474-24133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23477-23684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23477-23684 bp Feature: domain Description: GIIM Note: maturase Location: 23738-23969 bp Feature: domain Description: GIIM Note: maturase Location: 23738-23969 bp Feature: gene Location: 24172-24615 bp Feature: domain Description: DDE_Tnp_1 Location: 24241-24445 bp Feature: domain Description: DDE_Tnp_1 Location: 24241-24445 bp Feature: gene Location: 24812-25336 bp Feature: domain Description: DUF4372 Location: 24824-25037 bp Feature: domain Description: DUF4372 Location: 24824-25037 bp Feature: gene Location: 25436-26209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25772-26192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25772-26192 bp Feature: gene Location: 26692-27885 bp Feature: domain Description: PRK05764 Location: 26698-27877 bp Feature: domain Description: PRK05764 Location: 26698-27877 bp Feature: gene Location: 27958-28659 bp Feature: domain Description: BI-1-like_bacterial Location: 28009-28648 bp Feature: domain Description: BI-1-like_bacterial Location: 28009-28648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HemN (COG0635), RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609), DUF4372 (pfam14294), PRK05764 (aspartate aminotransferase; Provisional), BI-1-like_bacterial (cd10432)

Seq: CABKNL010000019.1 (42661 bp)
Overview 1 RT 1: 13583-21646 bp 2 RT 2: 39348-42658 bp Neighborhood of RT #1 [13583, 21816] CBM6-CBM35-CBM36_like_2 FN3 Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-GII Intron_maturas2 PIN_NicB-like Neighborhood of RT #2 [39348, 42660] DUF5020 AzgA RVT-GII Feature: gene Location: 13583-16450 bp Feature: domain Description: CBM6-CBM35-CBM36_like_2 Location: 14375-14711 bp Feature: domain Description: CBM6-CBM35-CBM36_like_2 Location: 14375-14711 bp Feature: domain Description: FN3 Location: 15350-15608 bp Feature: domain Description: FN3 Location: 15350-15608 bp Feature: gene Location: 16750-17910 bp Feature: domain Description: Arm-DNA-bind_5 Location: 16795-17035 bp Feature: domain Description: Arm-DNA-bind_5 Location: 16795-17035 bp Feature: domain Description: Phage_int_SAM_5 Location: 17104-17389 bp Feature: domain Description: Phage_int_SAM_5 Location: 17104-17389 bp Feature: domain Description: INTN1_C_like Location: 17434-17893 bp Feature: domain Description: INTN1_C_like Location: 17434-17893 bp Feature: gene Location: 18460-20268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18724-19546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18724-19546 bp Feature: domain Description: Intron_maturas2 Location: 19672-19924 bp Feature: domain Description: Intron_maturas2 Location: 19672-19924 bp Feature: gene Location: 20470-20841 bp Feature: gene Location: 21175-21816 bp Feature: domain Description: PIN_NicB-like Location: 21193-21646 bp Feature: domain Description: PIN_NicB-like Location: 21193-21646 bp Feature: gene Location: 39348-40049 bp Feature: domain Description: DUF5020 Location: 39408-40047 bp Feature: domain Description: DUF5020 Location: 39408-40047 bp Feature: gene Location: 40077-41363 bp Feature: domain Description: AzgA Location: 40080-41358 bp Feature: domain Description: AzgA Location: 40080-413 58 bp Feature: gene Location: 41890-42660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42232-42658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42232-42658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CBM6-CBM35-CBM36_like_2 (cd14488), FN3 (smart00060), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-GII, Intron_maturas2 (pfam01348), PIN_NicB-like (cd18722), DUF5020 (pfam16412), AzgA (COG2252)