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myRT report for GCA_902373765.1_MGYG-HGUT-01304
Download annotations/find similar RTs
Seq:
CABKNM010000002.1 (383504 bp)
Overview
1
RT 1: 115868-119872 bp
2
RT 2: 181760-187119 bp
3
RT 3: 195282-200616 bp
4
RT 4: 221330-226954 bp
5
RT 5: 285847-291351 bp
6
RT 6: 362343-366919 bp
Neighborhood of RT #1 [115868, 119907]
PRK02101
rpsO
RVT-GII
GIIM
MFS_SV2_like
Sortase_D_1
Neighborhood of RT #2 [181760, 187124]
Transposase_mut
IS285
RVT-GII
GIIM
M3B_PepF
rpsT
Neighborhood of RT #3 [195282, 200624]
PRK05572
sigpep_I_bact
RVT-GII
GIIM
LysR
PRK06520
Neighborhood of RT #4 [221330, 226992]
PRK13780
NGN
RVT-GII
GIIM
FlaA1
NeuD_NnaD
Neighborhood of RT #5 [285847, 291413]
EamA
EamA
DacC
RVT-GII
GIIM
COG4925
ARA1
Neighborhood of RT #6 [362343, 366919]
YhcF
CHAP
SH3_3
PG_binding_1
RVT-GII
GIIM
Feature: gene
Location: 115868-116053 bp
Feature: domain
Description: PRK02101
Location: 115874-116051 bp
Feature: domain
Description: PRK021 01
Location: 1 1 5874-1 1 6051 bp
Feature: gene
Location: 116171-116437 bp
Feature: domain
Description: rpsO
Location: 116174-116435 bp
Feature: domain
Description: rpsO
Location: 1 1 61 74-1 1 6435 bp
Feature: gene
Location: 116893-118311 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 117247-117862 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 1 1 7247-1 1 7862 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 117922-118150 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 1 1 7922-1 1 81 50 bp
Feature: gene
Location: 118416-119237 bp
Feature: domain
Description: MFS_SV2_like
Location: 118458-119217 bp
Feature: domain
Description: MFS_SV2_like
Location: 1 1 8458-1 1 921 7 bp
Feature: gene
Location: 119239-119907 bp
Feature: domain
Description: Sortase_D_1
Location: 119494-119872 bp
Feature: domain
Description: Sortase_D_1
Location: 1 1 9494-1 1 9872 bp
Feature: gene
Location: 181760-182476 bp
Feature: domain
Description: Transposase_mut
Location: 181823-182471 bp
Feature: domain
Description: Transposase_mut
Location: 1 81 823-1 82471 bp
Feature: gene
Location: 182552-182956 bp
Feature: domain
Description: IS285
Location: 182558-182954 bp
Feature: domain
Description: IS285
Location: 1 82558-1 82954 bp
Feature: gene
Location: 183068-184486 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 183422-184037 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 1 83422-1 84037 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 184097-184325 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 1 84097-1 84325 bp
Feature: gene
Location: 185051-186826 bp
Feature: domain
Description: M3B_PepF
Location: 185144-186803 bp
Feature: domain
Description: M3B_PepF
Location: 1 851 44-1 86803 bp
Feature: gene
Location: 186864-187124 bp
Feature: domain
Description: rpsT
Location: 186867-187119 bp
Feature: domain
Description: rpsT
Location: 1 86867-1 871 1 9 bp
Feature: gene
Location: 195282-196001 bp
Feature: domain
Description: PRK05572
Location: 195294-195996 bp
Feature: domain
Description: PRK05572
Location: 1 95294-1 95996 bp
Feature: gene
Location: 196035-196550 bp
Feature: domain
Description: sigpep_I_bact
Location: 196131-196539 bp
Feature: domain
Description: sigpep_I_bact
Location: 1 961 31 -1 96539 bp
Feature: gene
Location: 196980-198398 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 197334-197949 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 1 97334-1 97949 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 198009-198237 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 1 98009-1 98237 bp
Feature: gene
Location: 198492-199394 bp
Feature: domain
Description: LysR
Location: 198495-199386 bp
Feature: domain
Description: LysR
Location: 1 98495-1 99386 bp
Feature: gene
Location: 199506-200624 bp
Feature: domain
Description: PRK06520
Location: 199509-200616 bp
Feature: domain
Description: PRK06520
Location: 1 99509-20061 6 bp
Feature: gene
Location: 221330-221599 bp
Feature: domain
Description: PRK13780
Location: 221351-221591 bp
Feature: domain
Description: PRK1 3780
Location: 221 351 -221 591 bp
Feature: gene
Location: 221961-222452 bp
Feature: domain
Description: NGN
Location: 221967-222255 bp
Feature: domain
Description: NGN
Location: 221 967-222255 bp
Feature: gene
Location: 222990-224408 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 223344-223959 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 223344-223959 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 224019-224247 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 22401 9-224247 bp
Feature: gene
Location: 224500-226389 bp
Feature: domain
Description: FlaA1
Location: 224539-226354 bp
Feature: domain
Description: FlaA1
Location: 224539-226354 bp
Feature: gene
Location: 226393-226992 bp
Feature: domain
Description: NeuD_NnaD
Location: 226402-226954 bp
Feature: domain
Description: NeuD_NnaD
Location: 226402-226954 bp
Feature: gene
Location: 285847-286758 bp
Feature: domain
Description: EamA
Location: 285880-286270 bp
Feature: domain
Description: EamA
Location: 285880-286270 bp
Feature: domain
Description: EamA
Location: 286297-286699 bp
Feature: domain
Description: EamA
Location: 286297-286699 bp
Feature: gene
Location: 286751-287998 bp
Feature: domain
Description: DacC
Location: 286775-287885 bp
Feature: domain
Description: DacC
Location: 286775-287885 bp
Feature: gene
Location: 288430-289848 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 288784-289399 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 288784-289399 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 289459-289687 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 289459-289687 bp
Feature: gene
Location: 290010-290522 bp
Feature: domain
Description: COG4925
Location: 290082-290514 bp
Feature: domain
Description: COG4925
Location: 290082-29051 4 bp
Feature: gene
Location: 290538-291413 bp
Feature: domain
Description: ARA1
Location: 290544-291351 bp
Feature: domain
Description: ARA1
Location: 290544-291 351 bp
Feature: gene
Location: 362343-362717 bp
Feature: domain
Description: YhcF
Location: 362355-362712 bp
Feature: domain
Description: YhcF
Location: 362355-36271 2 bp
Feature: gene
Location: 362886-363974 bp
Feature: domain
Description: CHAP
Location: 363033-363288 bp
Feature: domain
Description: CHAP
Location: 363033-363288 bp
Feature: domain
Description: SH3_3
Location: 363450-363579 bp
Feature: domain
Description: SH3_3
Location: 363450-363579 bp
Feature: domain
Description: PG_binding_1
Location: 363798-363945 bp
Feature: domain
Description: PG_binding_1
Location: 363798-363945 bp
Feature: gene
Location: 364422-365840 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 364776-365391 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 364776-365391 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 365451-365679 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 365451 -365679 bp
Feature: gene
Location: 365975-366181 bp
Feature: gene
Location: 366380-366919 bp
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