myRT

myRT report for GCA_902374095.1_MGYG-HGUT-01345

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Seq: CABKPA010000020.1 (2493 bp)
Overview 1 RT 1: 151-2355 bp Neighborhood of RT #1 [151, 2384] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 151-360 bp Feature: gene Location: 573-2384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 837-1659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 837-1 659 bp Feature: domain Description: Intron_maturas2 Location: 1728-2055 bp Feature: domain Description: Intron_maturas2 Location: 1 728-2055 bp Feature: domain Description: HNHc Note: nucleases Location: 2211-2355 bp Feature: domain Description: HNHc Note: nucleases Location: 221 1 -2355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABKPA010000032.1 (414061 bp)
Overview 1 RT 1: 1203-4033 bp 2 RT 2: 43405-47261 bp 3 RT 3: 207937-220332 bp Neighborhood of RT #1 [1203, 4033] Mfa_like_1 DUF1566 HTH_28 RVT-GII Neighborhood of RT #2 [43405, 47269] Toprim_2 RVT-GII Intron_maturas2 dnaG Neighborhood of RT #3 [207937, 220463] PDDEXK_2 RVT-Retrons DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 rpsA Feature: gene Location: 1203-2483 bp Feature: domain Description: Mfa_like_1 Location: 1275-1686 bp Feature: domain Description: Mfa_like_1 Location: 12 75-1686 bp Feature: domain Description: DUF1566 Location: 2172-2472 bp Feature: domain Description: DUF1566 Location: 2 172 -2 472 bp Feature: gene Location: 2820-3110 bp Feature: domain Description: HTH_28 Location: 2844-2988 bp Feature: domain Description: HTH_2 8 Location: 2 844-2 988 bp Feature: gene Location: 3231-3428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3234-3426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 34-342 6 bp Feature: gene Location: 3458-3667 bp Feature: gene Location: 3671-4033 bp Feature: gene Location: 43405-43806 bp Feature: gene Location: 43834-44760 bp Feature: domain Description: Toprim_2 Location: 44383-44665 bp Feature: domain Description: Toprim_2 Location: 44383-44665 bp Feature: gene Location: 44732-46561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45017-45839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45017-45839 bp Feature: domain Description: Intron_maturas2 Location: 45908-46217 bp Feature: domain Description: Intron_maturas2 Location: 45908-462 17 bp Feature: gene Location: 46828-46971 bp Feature: gene Location: 47111-47269 bp Feature: domain Description: dnaG Location: 47180-47261 bp Feature: domain Description: dnaG Location: 47180-472 61 bp Feature: gene Location: 207937-208761 bp Feature: domain Description: PDDEXK_2 Location: 207958-208636 bp Feature: domain Description: PDDEXK_2 Location: 2 07958-2 08636 bp Feature: gene Location: 208930-211137 bp Feature: gene Location: 211345-212475 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 211666-212209 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 11666-2 12 2 09 bp Feature: gene Location: 212526-218567 bp Feature: domain Description: DUF4011 Location: 213756-214269 bp Feature: domain Description: DUF4011 Location: 2 13756-2 142 69 bp Feature: domain Description: DEXXQc_SF1 Location: 214608-215037 bp Feature: domain Description: DEXXQc_SF1 Location: 2 14608-2 15037 bp Feature: domain Description: DEXXQc_SF1 Location: 216039-216795 bp Feature: domain Description: DEXXQc_SF1 Location: 2 16039-2 16795 bp Feature: domain Description: TIGR00376 Location: 216924-217314 bp Feature: domain Description: TIGR00376 Location: 2 1692 4-2 17314 bp Feature: domain Description: MTES_1575 Location: 217467-217752 bp Feature: domain Description: MTES_1575 Location: 2 17467-2 17752 bp Feature: domain Description: DUF3320 Location: 218082-218217 bp Feature: domain Description: DUF332 0 Location: 2 18082 -2 182 17 bp Feature: gene Location: 218664-220463 bp Feature: domain Description: rpsA Location: 218733-220332 bp Feature: domain Description: rpsA Location: 2 18733-2 2 0332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABKPA010000034.1 (1143623 bp)
Overview 1 RT 1: 538578-545218 bp 2 RT 2: 768672-772203 bp Neighborhood of RT #1 [538578, 545274] REC RVT-Retrons Phage_int_SAM_5 INTN1_C_like NGN_SP_UpxY KOW_NusG Neighborhood of RT #2 [768672, 772203] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 538578-540269 bp Feature: domain Description: REC Location: 539385-539616 bp Feature: domain Description: REC Location: 53 93 85-53 9616 bp Feature: gene Location: 540278-540922 bp Feature: gene Location: 540900-543119 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 541101-541686 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 541101-541686 bp Feature: gene Location: 543395-544360 bp Feature: domain Description: Phage_int_SAM_5 Location: 543428-543671 bp Feature: domain Description: Phage_int_SAM_5 Location: 543 428-543 671 bp Feature: domain Description: INTN1_C_like Location: 543752-544274 bp Feature: domain Description: INTN1_C_like Location: 543 752-544274 bp Feature: gene Location: 544696-545274 bp Feature: domain Description: NGN_SP_UpxY Location: 544774-545056 bp Feature: domain Description: NGN_SP_UpxY Location: 544774-545056 bp Feature: domain Description: KOW_NusG Location: 545107-545218 bp Feature: domain Description: KOW_NusG Location: 545107-545218 bp Feature: gene Location: 768672-769481 bp Feature: domain Description: DUF1566 Location: 769203-769452 bp Feature: domain Description: DUF1566 Location: 769203 -769452 bp Feature: gene Location: 769628-770035 bp Feature: domain Description: Avd_like Location: 769661-769970 bp Feature: domain Description: Avd_like Location: 769661-769970 bp Feature: gene Location: 770050-771471 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 770425-771127 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 770425-771127 bp Feature: gene Location: 771434-771712 bp Feature: gene Location: 771910-772203 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABKPA010000019.1 (2491 bp)
Overview 1 RT 1: 107-2437 bp Neighborhood of RT #1 [107, 2437] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 107-1918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371-1193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371-1193 bp Feature: domain Description: Intron_maturas2 Location: 1268-1583 bp Feature: domain Description: Intron_maturas2 Location: 1268-1583 bp Feature: domain Description: HNHc Note: nucleases Location: 1739-1889 bp Feature: domain Description: HNHc Note: nucleases Location: 1739-1889 bp Feature: gene Location: 2264-2437 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT