myRT

myRT report for GCA_902374375.1_MGYG-HGUT-01364

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Seq: CABKPU010000016.1 (571288 bp)
Overview 1 RT 1: 540358-544289 bp 2 RT 2: 567924-571286 bp Neighborhood of RT #1 [540358, 545269] Imm17 TraG-D_C RVT-GII Intron_maturas2 HNHc YWFCY Neighborhood of RT #2 [567924, 571286] COG3943 RVT-GII Intron_maturas2 Arm-DNA-bind_5 Feature: gene Location: 540358-540639 bp Feature: domain Description: Imm17 Location: 540448-540625 bp Feature: domain Description: Imm1 7 Location: 540448-540625 bp Feature: gene Location: 540794-541798 bp Feature: domain Description: TraG-D_C Location: 541172-541505 bp Feature: domain Description: TraG-D_C Location: 541 1 72-541 505 bp Feature: gene Location: 541762-543579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 542029-542851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 542029-542851 bp Feature: domain Description: Intron_maturas2 Location: 543001-543229 bp Feature: domain Description: Intron_maturas2 Location: 543001 -543229 bp Feature: domain Description: HNHc Note: nucleases Location: 543400-543550 bp Feature: domain Description: HNHc Note: nucleases Location: 543400-543550 bp Feature: gene Location: 543746-544030 bp Feature: gene Location: 544106-545269 bp Feature: domain Description: YWFCY Location: 544112-544289 bp Feature: domain Description: YWFCY Location: 5441 1 2-544289 bp Feature: gene Location: 567924-568289 bp Feature: domain Description: COG3943 Location: 567969-568233 bp Feature: domain Description: COG3943 Location: 567969-568233 bp Feature: gene Location: 568318-568455 bp Feature: gene Location: 568556-569767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568610-569045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56861 0-569045 bp Feature: domain Description: Intron_maturas2 Location: 569171-569426 bp Feature: domain Description: Intron_maturas2 Location: 5691 71 -569426 bp Feature: gene Location: 570030-570512 bp Feature: domain Description: Arm-DNA-bind_5 Location: 570060-570315 bp Feature: domain Description: Arm-DNA-bind_5 Location: 570060-57031 5 bp Feature: gene Location: 570927-571286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABKPU010000017.1 (287742 bp)
Overview 1 RT 1: 218238-222074 bp Neighborhood of RT #1 [218238, 222074] RVT-DGRs Feature: gene Location: 218238-218546 bp Feature: gene Location: 218801-219289 bp Feature: gene Location: 219291-220592 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 219504-220098 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 19504-2 2 0098 bp Feature: gene Location: 220794-220958 bp Feature: gene Location: 221871-222074 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABKPU010000004.1 (148376 bp)
Overview 1 RT 1: 60332-63152 bp 2 RT 2: 125420-129561 bp Neighborhood of RT #1 [60332, 63152] RVT-DGRs Neighborhood of RT #2 [125420, 129561] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-GII Intron_maturas2 Feature: gene Location: 60332-60574 bp Feature: gene Location: 60760-61209 bp Feature: gene Location: 61242-62543 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 61455-62049 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 61455-62049 bp Feature: gene Location: 62640-62897 bp Feature: gene Location: 62919-63152 bp Feature: gene Location: 125420-126601 bp Feature: domain Description: Arm-DNA-bind_5 Location: 125468-125711 bp Feature: domain Description: Arm-DNA-bind_5 Location: 125468-125711 bp Feature: domain Description: Phage_int_SAM_5 Location: 125759-126065 bp Feature: domain Description: Phage_int_SAM_5 Location: 125759-126065 bp Feature: domain Description: INTN1_C_like Location: 126119-126584 bp Feature: domain Description: INTN1_C_like Location: 126119-126584 bp Feature: gene Location: 126790-126918 bp Feature: gene Location: 127152-128960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127416-128238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127416-12823 8 bp Feature: domain Description: Intron_maturas2 Location: 128364-128619 bp Feature: domain Description: Intron_maturas2 Location: 1283 64-128619 bp Feature: gene Location: 129070-129270 bp Feature: gene Location: 129361-129561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABKPU010000006.1 (760260 bp)
Overview 1 RT 1: 66069-72554 bp 2 RT 2: 527949-531910 bp Neighborhood of RT #1 [66069, 72554] Relaxase Relaxase YWFCY RVT_N RVT-GII GIIM TraG-D_C Neighborhood of RT #2 [527949, 531910] RVT-GII Intron_maturas2 INTN1_C_like Feature: gene Location: 66069-67331 bp Feature: domain Description: Relaxase Location: 66210-66669 bp Feature: domain Description: Relaxase Location: 66210-66669 bp Feature: domain Description: Relaxase Location: 66879-67092 bp Feature: domain Description: Relaxase Location: 66879-67092 bp Feature: gene Location: 67394-68317 bp Feature: domain Description: YWFCY Location: 67400-67577 bp Feature: domain Description: YWFCY Location: 674 00-67577 bp Feature: gene Location: 68954-70606 bp Feature: domain Description: RVT_N Location: 69008-69251 bp Feature: domain Description: RVT_N Location: 69008-69251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69296-69944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69296-6994 4 bp Feature: domain Description: GIIM Note: maturase Location: 69998-70229 bp Feature: domain Description: GIIM Note: maturase Location: 69998-70229 bp Feature: gene Location: 70611-71846 bp Feature: domain Description: TraG-D_C Location: 71193-71526 bp Feature: domain Description: TraG-D_C Location: 71193-71526 bp Feature: gene Location: 72018-72554 bp Feature: gene Location: 527949-528131 bp Feature: gene Location: 528421-528618 bp Feature: gene Location: 528834-530642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 529098-529920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 529098-529920 bp Feature: domain Description: Intron_maturas2 Location: 530046-530301 bp Feature: domain Description: Intron_maturas2 Location: 53004 6-530301 bp Feature: gene Location: 531193-531393 bp Feature: domain Description: INTN1_C_like Location: 531226-531376 bp Feature: domain Description: INTN1_C_like Location: 531226-531376 bp Feature: gene Location: 531683-531910 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABKPU010000002.1 (722256 bp)
Overview 1 RT 1: 336097-340543 bp 2 RT 2: 361202-367925 bp Neighborhood of RT #1 [336097, 340581] Phage_int_SAM_5 INTN1_C_like RVT-GII Intron_maturas2 COG3943 HTH_17 Neighborhood of RT #2 [361202, 367925] KAP_NTPase TraG-D_C RVT_N RVT-GII GIIM Feature: gene Location: 336097-337263 bp Feature: domain Description: Phage_int_SAM_5 Location: 336421-336727 bp Feature: domain Description: Phage_int_SAM_5 Location: 336421-336727 bp Feature: domain Description: INTN1_C_like Location: 336781-337246 bp Feature: domain Description: INTN1_C_like Location: 336781-337246 bp Feature: gene Location: 337452-337580 bp Feature: gene Location: 337814-339622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 338078-338900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 338078-338900 bp Feature: domain Description: Intron_maturas2 Location: 339026-339281 bp Feature: domain Description: Intron_maturas2 Location: 339026-339281 bp Feature: gene Location: 339836-340198 bp Feature: domain Description: COG3943 Location: 339875-340124 bp Feature: domain Description: COG3943 Location: 339875 -340124 bp Feature: gene Location: 340276-340581 bp Feature: domain Description: HTH_17 Location: 340414-340543 bp Feature: domain Description: HTH_17 Location: 340414-3405 43 bp Feature: gene Location: 361202-364456 bp Feature: domain Description: KAP_NTPase Location: 361340-362318 bp Feature: domain Description: KAP_NTPase Location: 361340-362318 bp Feature: gene Location: 364588-365802 bp Feature: domain Description: TraG-D_C Location: 365170-365500 bp Feature: domain Description: TraG-D_C Location: 365 170-365 5 00 bp Feature: gene Location: 365807-367459 bp Feature: domain Description: RVT_N Location: 365861-366104 bp Feature: domain Description: RVT_N Location: 365 861-366104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366149-366797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366149-366797 bp Feature: domain Description: GIIM Note: maturase Location: 366851-367082 bp Feature: domain Description: GIIM Note: maturase Location: 36685 1-367082 bp Feature: gene Location: 367541-367714 bp Feature: gene Location: 367776-367925 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT