myRT

myRT report for GCA_902374415.1_MGYG-HGUT-01378

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Seq: CABKQC010000002.1 (911794 bp)
Overview 1 RT 1: 157084-172407 bp 2 RT 2: 269519-280901 bp Neighborhood of RT #1 [157084, 172433] LPD14 InPase ART-PolyVal ART-PolyVal ART-PolyVal LPD38 RVT-DGRs Avd_like DUF1566 Neighborhood of RT #2 [269519, 280901] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-DGRs Laminin_G_3 pfam08757 LRR_AMN1 Feature: gene Location: 157084-168780 bp Feature: domain Description: LPD14 Location: 158353-158734 bp Feature: domain Description: LPD1 4 Location: 1 58353-1 58734 bp Feature: domain Description: InPase Location: 161203-161680 bp Feature: domain Description: InPase Location: 1 61 203-1 61 680 bp Feature: domain Description: ART-PolyVal Location: 162295-162808 bp Feature: domain Description: ART-PolyVal Location: 1 62295-1 62808 bp Feature: domain Description: ART-PolyVal Location: 162841-163162 bp Feature: domain Description: ART-PolyVal Location: 1 62841 -1 631 62 bp Feature: domain Description: ART-PolyVal Location: 163762-163960 bp Feature: domain Description: ART-PolyVal Location: 1 63762-1 63960 bp Feature: domain Description: LPD38 Location: 167833-168442 bp Feature: domain Description: LPD38 Location: 1 67833-1 68442 bp Feature: gene Location: 168795-169034 bp Feature: gene Location: 169659-171080 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 170031-170736 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 70031 -1 70736 bp Feature: gene Location: 171095-171475 bp Feature: domain Description: Avd_like Location: 171122-171428 bp Feature: domain Description: Avd_like Location: 1 71 1 22-1 71 428 bp Feature: gene Location: 171621-172433 bp Feature: domain Description: DUF1566 Location: 172155-172407 bp Feature: domain Description: DUF1 566 Location: 1 721 55-1 72407 bp Feature: gene Location: 269519-270664 bp Feature: domain Description: Arm-DNA-bind_5 Location: 269543-269789 bp Feature: domain Description: Arm-DNA-bind_5 Location: 269543-269789 bp Feature: domain Description: Phage_int_SAM_5 Location: 269828-270113 bp Feature: domain Description: Phage_int_SAM_5 Location: 269828-2701 1 3 bp Feature: domain Description: INTN1_C_like Location: 270152-270626 bp Feature: domain Description: INTN1 _C_like Location: 2701 52-270626 bp Feature: gene Location: 270714-271208 bp Feature: gene Location: 271210-272565 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 271486-272077 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 271 486-272077 bp Feature: gene Location: 272937-279725 bp Feature: domain Description: Laminin_G_3 Location: 275376-275754 bp Feature: domain Description: Laminin_G_3 Location: 275376-275754 bp Feature: domain Description: pfam08757 Location: 276549-276873 bp Feature: domain Description: pfam08757 Location: 276549-276873 bp Feature: domain Description: LRR_AMN1 Location: 277479-277950 bp Feature: domain Description: LRR_AMN1 Location: 277479-277950 bp Feature: gene Location: 279735-280901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LPD14 (pfam18827), InPase (pfam18823), ART-PolyVal (pfam18760), LPD38 (pfam18857), RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)
Laminin_G_3 (pfam13385), pfam08757 (CotH;CotH kinase protein), LRR_AMN1 (sd00034)

Seq: CABKQC010000003.1 (801465 bp)
Overview 1 RT 1: 81321-84529 bp Neighborhood of RT #1 [81321, 84529] RVT-UG27 Feature: gene Location: 81321-81599 bp Feature: gene Location: 81629-81895 bp Feature: gene Location: 81945-83207 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 82137-82773 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 82 137-82 773 bp Feature: gene Location: 83200-83868 bp Feature: gene Location: 83882-84529 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: CABKQC010000004.1 (518537 bp)
Overview 1 RT 1: 227455-239879 bp Neighborhood of RT #1 [227455, 239995] RVT-Retrons DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 rpsA Feature: gene Location: 227455-227928 bp Feature: gene Location: 228594-230801 bp Feature: gene Location: 231007-232137 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 231328-231871 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23 13 28-23 1871 bp Feature: gene Location: 232139-238096 bp Feature: domain Description: DUF4011 Location: 233369-233882 bp Feature: domain Description: DUF4011 Location: 23 3 3 69-23 3 882 bp Feature: domain Description: DEXXQc_SF1 Location: 234221-235187 bp Feature: domain Description: DEXXQc_SF1 Location: 23 4221-23 5187 bp Feature: domain Description: DEXXQc_SF1 Location: 235649-236408 bp Feature: domain Description: DEXXQc_SF1 Location: 23 5649-23 6408 bp Feature: domain Description: TIGR00376 Location: 236537-236927 bp Feature: domain Description: TIGR003 76 Location: 23 653 7-23 6927 bp Feature: domain Description: MTES_1575 Location: 237080-237365 bp Feature: domain Description: MTES_1575 Location: 23 7080-23 73 65 bp Feature: domain Description: DUF3320 Location: 237605-237746 bp Feature: domain Description: DUF3 3 20 Location: 23 7605-23 7746 bp Feature: gene Location: 238193-239995 bp Feature: domain Description: rpsA Location: 238262-239879 bp Feature: domain Description: rpsA Location: 23 8262-23 9879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), TIGR00376 (DNA helicase, putative), MTES_1575 (pfam18741), DUF3320 (pfam11784), rpsA (TIGR00717)