myRT

myRT report for GCA_902374645.1_MGYG-HGUT-01398

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Seq: CABKQZ010000003.1 (312834 bp)
Overview 1 RT 1: 236106-243373 bp Neighborhood of RT #1 [236106, 243477] CdAMP_rec NagA RVT-GII RVT-GII GIIM COG5263 Spr MrcB Feature: gene Location: 236106-236429 bp Feature: domain Description: CdAMP_rec Location: 236109-236424 bp Feature: domain Description: CdAMP_rec Location: 2361 09-236424 bp Feature: gene Location: 236886-237989 bp Feature: domain Description: NagA Location: 236898-237975 bp Feature: domain Description: NagA Location: 236898-237975 bp Feature: gene Location: 238619-239131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 238784-239126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 238784-2391 26 bp Feature: gene Location: 239298-239900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 239304-239400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 239304-239400 bp Feature: domain Description: GIIM Note: maturase Location: 239460-239691 bp Feature: domain Description: GIIM Note: maturase Location: 239460-239691 bp Feature: gene Location: 240186-241385 bp Feature: domain Description: COG5263 Location: 240300-240729 bp Feature: domain Description: COG5263 Location: 240300-240729 bp Feature: domain Description: Spr Location: 240858-241326 bp Feature: domain Description: Spr Location: 240858-241 326 bp Feature: gene Location: 241612-243477 bp Feature: domain Description: MrcB Location: 241648-243373 bp Feature: domain Description: MrcB Location: 241 648-243373 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABKQZ010000001.1 (2298056 bp)
Overview 1 RT 1: 66724-71750 bp 2 RT 2: 256236-260982 bp 3 RT 3: 881456-887350 bp 4 RT 4: 897764-911231 bp 5 RT 5: 1966409-1973235 bp Neighborhood of RT #1 [66724, 71750] cls RVT-GII GIIM GIIM Pat_hypo_Ecoli_yjju_like Neighborhood of RT #2 [256236, 260987] COG3464 RVT-GII DDE_Tnp_ISL3 CspC Neighborhood of RT #3 [881456, 887367] RVT-GII TraC-F-type 3D_containing_proteins NlpD Spr Neighborhood of RT #4 [897764, 911611] YtxK COG4646 RVT-GII KOG1000 YodL LPD16 DUF4316 LPD25 Neighborhood of RT #5 [1966409, 1973235] Spr RVT-GII Intron_maturas2 VirB4_CagE TraC-F-type Feature: gene Location: 66724-68262 bp Feature: domain Description: cls Location: 66847-68257 bp Feature: domain Description: cls Location: 66847-682 57 bp Feature: gene Location: 68475-68633 bp Feature: gene Location: 68938-70383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69166-69787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69166-69787 bp Feature: domain Description: GIIM Note: maturase Location: 69865-69988 bp Feature: domain Description: GIIM Note: maturase Location: 69865-69988 bp Feature: domain Description: GIIM Note: maturase Location: 70057-70126 bp Feature: domain Description: GIIM Note: maturase Location: 70057-7012 6 bp Feature: gene Location: 70600-71457 bp Feature: domain Description: Pat_hypo_Ecoli_yjju_like Location: 70621-71413 bp Feature: domain Description: Pat_hypo_Ecoli_yjju_like Location: 7062 1-71413 bp Feature: gene Location: 71559-71750 bp Feature: gene Location: 256236-256892 bp Feature: domain Description: COG3464 Location: 256248-256863 bp Feature: domain Description: COG3464 Location: 2 562 48-2 56863 bp Feature: gene Location: 257868-258053 bp Feature: gene Location: 258106-259782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258187-258913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 58187-2 58913 bp Feature: gene Location: 259914-260603 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 259917-260508 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 2 59917-2 60508 bp Feature: gene Location: 260787-260987 bp Feature: domain Description: CspC Location: 260790-260982 bp Feature: domain Description: CspC Location: 2 60790-2 60982 bp Feature: gene Location: 881456-881587 bp Feature: gene Location: 881742-881945 bp Feature: gene Location: 881945-883945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882332-883070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882 332 -883070 bp Feature: gene Location: 883989-884420 bp Feature: domain Description: TraC-F-type Location: 884058-884313 bp Feature: domain Description: TraC-F-type Location: 884058-884313 bp Feature: gene Location: 884551-887367 bp Feature: domain Description: 3D_containing_proteins Location: 886129-886396 bp Feature: domain Description: 3D_containing_proteins Location: 88612 9-886396 bp Feature: domain Description: NlpD Location: 886534-886969 bp Feature: domain Description: NlpD Location: 886534-886969 bp Feature: domain Description: Spr Location: 886999-887350 bp Feature: domain Description: Spr Location: 886999-887350 bp Feature: gene Location: 897764-898852 bp Feature: gene Location: 898921-905571 bp Feature: domain Description: YtxK Location: 901726-902587 bp Feature: domain Description: YtxK Location: 90172 6-902 587 bp Feature: domain Description: COG4646 Location: 902647-905212 bp Feature: domain Description: COG4646 Location: 902 647-9052 12 bp Feature: gene Location: 905926-907602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 906007-906733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 906007-906733 bp Feature: gene Location: 907740-908792 bp Feature: domain Description: KOG1000 Location: 907752-907962 bp Feature: domain Description: KOG1000 Location: 907752 -907962 bp Feature: gene Location: 908873-911611 bp Feature: domain Description: YodL Location: 909653-909947 bp Feature: domain Description: YodL Location: 909653-909947 bp Feature: domain Description: LPD16 Location: 909977-910196 bp Feature: domain Description: LPD16 Location: 909977-910196 bp Feature: domain Description: DUF4316 Location: 910247-910331 bp Feature: domain Description: DUF4316 Location: 9102 47-910331 bp Feature: domain Description: LPD25 Location: 910940-911231 bp Feature: domain Description: LPD2 5 Location: 910940-9112 31 bp Feature: gene Location: 1966409-1968364 bp Feature: domain Description: Spr Location: 1967990-1968347 bp Feature: domain Description: Spr Location: 1967990-1968347 bp Feature: gene Location: 1968528-1968659 bp Feature: gene Location: 1968768-1970558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1969035-1969848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1969035-1969848 bp Feature: domain Description: Intron_maturas2 Location: 1969932-1970229 bp Feature: domain Description: Intron_maturas2 Location: 1969932 -19702 2 9 bp Feature: gene Location: 1971052-1973226 bp Feature: domain Description: VirB4_CagE Location: 1971169-1971412 bp Feature: domain Description: VirB4_CagE Location: 1971169-1971412 bp Feature: domain Description: TraC-F-type Location: 1971856-1973188 bp Feature: domain Description: TraC-F-type Location: 1971856-1973188 bp Feature: gene Location: 1972375-1973235 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT