myRT

myRT report for GCA_902374815.1_MGYG-HGUT-01422

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Seq: CABKRN010000015.1 (2512 bp)
Overview 1 RT 1: 217-2320 bp Neighborhood of RT #1 [217, 2320] RVT_N RVT-GII GIIM Feature: gene Location: 217-1869 bp Feature: domain Description: RVT_N Location: 271-514 bp Feature: domain Description: RVT_N Location: 271 -51 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 559-1207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 559-1 207 bp Feature: domain Description: GIIM Note: maturase Location: 1261-1492 bp Feature: domain Description: GIIM Note: maturase Location: 1 261 -1 492 bp Feature: gene Location: 2186-2320 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CABKRN010000011.1 (11749 bp)
Overview 1 RT 1: 4390-8053 bp Neighborhood of RT #1 [4390, 8053] Tra8 RVT-GII GIIM Feature: gene Location: 4390-4593 bp Feature: gene Location: 4610-5590 bp Feature: domain Description: Tra8 Location: 4619-5564 bp Feature: domain Description: Tra8 Location: 4619-5564 bp Feature: gene Location: 6031-7326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6226-6841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 2 6-6841 bp Feature: domain Description: GIIM Note: maturase Location: 6913-7126 bp Feature: domain Description: GIIM Note: maturase Location: 6913-712 6 bp Feature: gene Location: 7559-7723 bp Feature: gene Location: 7856-8053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), RVT-GII, GIIM (pfam08388)

Seq: CABKRN010000009.1 (50350 bp)
Overview 1 RT 1: 19382-28311 bp Neighborhood of RT #1 [19382, 28311] Relaxase YWFCY RVT_N RVT-GII GIIM RVT_N RVT-GII GIIM TraG-D_C Feature: gene Location: 19382-20629 bp Feature: domain Description: Relaxase Location: 19562-19943 bp Feature: domain Description: Relaxase Location: 19562-19943 bp Feature: gene Location: 20660-21586 bp Feature: domain Description: YWFCY Location: 20669-20846 bp Feature: domain Description: YWFCY Location: 20669-20846 bp Feature: gene Location: 22224-23876 bp Feature: domain Description: RVT_N Location: 22278-22521 bp Feature: domain Description: RVT_N Location: 22278-22521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22566-23214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22566-23 214 bp Feature: domain Description: GIIM Note: maturase Location: 23268-23499 bp Feature: domain Description: GIIM Note: maturase Location: 23 268-23 499 bp Feature: gene Location: 24641-26293 bp Feature: domain Description: RVT_N Location: 24695-24938 bp Feature: domain Description: RVT_N Location: 24695-2493 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24983-25631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24983 -2563 1 bp Feature: domain Description: GIIM Note: maturase Location: 25685-25916 bp Feature: domain Description: GIIM Note: maturase Location: 25685-25916 bp Feature: gene Location: 26214-27503 bp Feature: domain Description: TraG-D_C Location: 26880-27210 bp Feature: domain Description: TraG-D_C Location: 26880-27210 bp Feature: gene Location: 27556-28311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), YWFCY (pfam14293), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696)

Seq: CABKRN010000001.1 (1947083 bp)
Overview 1 RT 1: 716355-721664 bp 2 RT 2: 743724-747462 bp 3 RT 3: 1772501-1784753 bp Neighborhood of RT #1 [716355, 721664] RVT-GII GIIM Neighborhood of RT #2 [743724, 747462] RVT-UG27 Neighborhood of RT #3 [1772501, 1784770] SusD-like OMP_RagA_SusC RVT_N RVT-GII GIIM RVT_N RVT-GII GIIM STN OMP_RagA_SusC COG3537 Feature: gene Location: 716355-716822 bp Feature: gene Location: 716846-717697 bp Feature: gene Location: 717709-719103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 718039-718657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 718039-718657 bp Feature: domain Description: GIIM Note: maturase Location: 718714-718942 bp Feature: domain Description: GIIM Note: maturase Location: 718714 -71894 2 bp Feature: gene Location: 719651-720154 bp Feature: gene Location: 720282-721664 bp Feature: gene Location: 743724-744185 bp Feature: gene Location: 744691-744837 bp Feature: gene Location: 745217-746482 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 745406-746042 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 74 54 06-74 604 2 bp Feature: gene Location: 746472-746873 bp Feature: gene Location: 746860-747462 bp Feature: gene Location: 1772501-1774123 bp Feature: domain Description: SusD-like Location: 1772588-1774106 bp Feature: domain Description: SusD-like Location: 1772588-1774 106 bp Feature: gene Location: 1774137-1776623 bp Feature: domain Description: OMP_RagA_SusC Location: 1774197-1776618 bp Feature: domain Description: OMP_RagA_SusC Location: 1774 197-1776618 bp Feature: gene Location: 1777270-1778922 bp Feature: domain Description: RVT_N Location: 1777324-1777567 bp Feature: domain Description: RVT_N Location: 1777324 -1777567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1777612-1778260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1777612-1778260 bp Feature: domain Description: GIIM Note: maturase Location: 1778314-1778545 bp Feature: domain Description: GIIM Note: maturase Location: 1778314 -177854 5 bp Feature: gene Location: 1779687-1781339 bp Feature: domain Description: RVT_N Location: 1779741-1779984 bp Feature: domain Description: RVT_N Location: 177974 1-1779984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1780029-1780677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1780029-1780677 bp Feature: domain Description: GIIM Note: maturase Location: 1780731-1780962 bp Feature: domain Description: GIIM Note: maturase Location: 1780731-1780962 bp Feature: gene Location: 1781452-1782300 bp Feature: domain Description: STN Location: 1781617-1781767 bp Feature: domain Description: STN Location: 1781617-1781767 bp Feature: domain Description: OMP_RagA_SusC Location: 1781809-1782292 bp Feature: domain Description: OMP_RagA_SusC Location: 1781809-1782292 bp Feature: gene Location: 1782491-1784770 bp Feature: domain Description: COG3537 Location: 1782551-1784753 bp Feature: domain Description: COG3537 Location: 1782551-1784 753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RVT-UG27, SusD-like (pfam12741), OMP_RagA_SusC (TIGR04056), RVT_N (pfam13655), STN (smart00965), COG3537 (Putative alpha-1,2-mannosidase )

Seq: CABKRN010000006.1 (422566 bp)
Overview 1 RT 1: 92395-98934 bp 2 RT 2: 281104-284483 bp Neighborhood of RT #1 [92395, 99674] Imm17 TraG-D_C RVT_N RVT-GII GIIM RVT_N RVT-GII GIIM YWFCY Neighborhood of RT #2 [281104, 284483] RVT-DGRs Feature: gene Location: 92395-92676 bp Feature: domain Description: Imm17 Location: 92485-92662 bp Feature: domain Description: Imm17 Location: 92485 -92662 bp Feature: gene Location: 92831-94039 bp Feature: domain Description: TraG-D_C Location: 93413-93746 bp Feature: domain Description: TraG-D_C Location: 93413-93746 bp Feature: gene Location: 94044-95696 bp Feature: domain Description: RVT_N Location: 94098-94341 bp Feature: domain Description: RVT_N Location: 94098-94341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94386-95034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94386-95 034 bp Feature: domain Description: GIIM Note: maturase Location: 95088-95319 bp Feature: domain Description: GIIM Note: maturase Location: 95 088-95 319 bp Feature: gene Location: 96013-96147 bp Feature: gene Location: 96461-98113 bp Feature: domain Description: RVT_N Location: 96515-96758 bp Feature: domain Description: RVT_N Location: 965 15 -9675 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96803-97451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96803-9745 1 bp Feature: domain Description: GIIM Note: maturase Location: 97505-97736 bp Feature: domain Description: GIIM Note: maturase Location: 975 05 -97736 bp Feature: gene Location: 98430-98564 bp Feature: gene Location: 98751-99674 bp Feature: domain Description: YWFCY Location: 98757-98934 bp Feature: domain Description: YWFCY Location: 9875 7-98934 bp Feature: gene Location: 281104-282423 bp Feature: gene Location: 282453-282656 bp Feature: gene Location: 282940-283755 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 283273-283597 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 283273-2835 97 bp Feature: gene Location: 283721-283951 bp Feature: gene Location: 283899-284483 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Imm17 (pfam15562), TraG-D_C (pfam12696), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), YWFCY (pfam14293), RVT-DGRs