myRT

myRT report for GCA_902377455.1_MGYG-HGUT-01688

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Seq: CABLBO010000014.1 (93996 bp)
Overview 1 RT 1: 35623-39919 bp Neighborhood of RT #1 [35623, 39919] ClpA RVT-UG14 Feature: gene Location: 35623-36426 bp Feature: gene Location: 36419-37531 bp Feature: domain Description: ClpA Location: 36770-37253 bp Feature: domain Description: ClpA Location: 36770-37253 bp Feature: gene Location: 37601-38239 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 37952-38225 bp Feature: RT Description: RVT-UG1 4 Note: UG1 4 RT Location: 37952-38225 bp Feature: gene Location: 38239-38955 bp Feature: gene Location: 39683-39919 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ClpA (TIGR02639), RVT-UG14

Seq: CABLBO010000001.1 (485302 bp)
Overview 1 RT 1: 106470-111444 bp Neighborhood of RT #1 [106470, 111444] TadB CpaF RVT-GII HNHc Feature: gene Location: 106470-107402 bp Feature: domain Description: TadB Location: 106677-107331 bp Feature: domain Description: TadB Location: 106677-107331 bp Feature: gene Location: 107403-108509 bp Feature: domain Description: CpaF Location: 107475-108354 bp Feature: domain Description: CpaF Location: 107475-108354 bp Feature: gene Location: 108558-110384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108873-109572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108873-109572 bp Feature: domain Description: HNHc Note: nucleases Location: 110121-110262 bp Feature: domain Description: HNHc Note: nucleases Location: 11012 1-1102 62 bp Feature: gene Location: 110941-111072 bp Feature: gene Location: 111118-111444 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TadB (COG4965), CpaF (COG4962), RVT-GII, HNHc (smart00507)

Seq: CABLBO010000079.1 (4602 bp)
Overview 1 RT 1: 110-2012 bp Neighborhood of RT #1 [110, 2017] Phage_holin_5_2 RVT-DGRs Phage_XkdX Feature: gene Location: 110-406 bp Feature: domain Description: Phage_holin_5_2 Location: 158-389 bp Feature: domain Description: Phage_holin_5_2 Location: 158-3 89 bp Feature: gene Location: 418-756 bp Feature: gene Location: 759-1190 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 762-906 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 762-906 bp Feature: gene Location: 1392-1877 bp Feature: gene Location: 1874-2017 bp Feature: domain Description: Phage_XkdX Location: 1895-2012 bp Feature: domain Description: Phage_XkdX Location: 1895-2012 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_5_2 (pfam16079), RVT-DGRs, Phage_XkdX (pfam09693)