myRT

myRT report for GCA_902377625.1_MGYG-HGUT-01711

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Seq: CABLCL010000048.1 (106206 bp)
Overview 1 RT 1: 88873-91664 bp 2 RT 2: 99746-104466 bp Neighborhood of RT #1 [88873, 91744] PRK10562 group_II_RT_mat RVT-GII Acetyltransf_1 Neighborhood of RT #2 [99746, 104525] Maff2 VirD4 RVT-GII VirD4 Feature: gene Location: 88873-89298 bp Feature: domain Description: PRK10562 Location: 88876-89293 bp Feature: domain Description: PRK1 0562 Location: 88876-89293 bp Feature: gene Location: 89430-89747 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 89442-89655 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 89442-89655 bp Feature: gene Location: 89814-90725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90069-90681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90069-90681 bp Feature: gene Location: 90815-91060 bp Feature: gene Location: 91223-91744 bp Feature: domain Description: Acetyltransf_1 Location: 91349-91664 bp Feature: domain Description: Acetyltransf_1 Location: 91 349-91 664 bp Feature: gene Location: 99746-99877 bp Feature: domain Description: Maff2 Location: 99749-99875 bp Feature: domain Description: Maff2 Location: 99749-99875 bp Feature: gene Location: 100005-101228 bp Feature: domain Description: VirD4 Location: 100068-101085 bp Feature: domain Description: VirD4 Location: 1 00068-1 01 085 bp Feature: gene Location: 101325-103196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101637-102381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 637-1 02381 bp Feature: gene Location: 103354-103674 bp Feature: gene Location: 103824-104525 bp Feature: domain Description: VirD4 Location: 104079-104466 bp Feature: domain Description: VirD4 Location: 1 04079-1 04466 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10562 (putative acetyltransferase; Provisional), group_II_RT_mat (TIGR04416), RVT-GII, Acetyltransf_1 (pfam00583), Maff2 (pfam12750), VirD4 (COG3505)

Seq: CABLCL010000157.1 (1906 bp)
Overview 1 RT 1: 241-1422 bp Neighborhood of RT #1 [241, 1802] RVT-GII Feature: gene Location: 241-411 bp Feature: gene Location: 414-1802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 759-1422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 759-142 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CABLCL010000109.1 (77028 bp)
Overview 1 RT 1: 36931-43350 bp Neighborhood of RT #1 [36931, 43427] Tup_N DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 DUF4379 RVT-GII GIIM RVT-GII NLPC_P60 Feature: gene Location: 36931-37650 bp Feature: domain Description: Tup_N Location: 37258-37438 bp Feature: domain Description: Tup_N Location: 3 7258-3 743 8 bp Feature: gene Location: 37643-40399 bp Feature: domain Description: DUF4379 Location: 37679-37838 bp Feature: domain Description: DUF43 79 Location: 3 7679-3 783 8 bp Feature: domain Description: DUF4379 Location: 37871-38030 bp Feature: domain Description: DUF43 79 Location: 3 7871-3 803 0 bp Feature: domain Description: DUF4379 Location: 38087-38267 bp Feature: domain Description: DUF43 79 Location: 3 8087-3 8267 bp Feature: domain Description: DUF4379 Location: 38309-38474 bp Feature: domain Description: DUF43 79 Location: 3 83 09-3 8474 bp Feature: domain Description: DUF4379 Location: 38522-38681 bp Feature: domain Description: DUF43 79 Location: 3 8522-3 8681 bp Feature: domain Description: DUF4379 Location: 38714-38870 bp Feature: domain Description: DUF43 79 Location: 3 8714-3 8870 bp Feature: domain Description: DUF4379 Location: 38921-39077 bp Feature: domain Description: DUF43 79 Location: 3 8921-3 9077 bp Feature: domain Description: DUF4379 Location: 39134-39287 bp Feature: domain Description: DUF43 79 Location: 3 913 4-3 9287 bp Feature: domain Description: DUF4379 Location: 39338-39497 bp Feature: domain Description: DUF43 79 Location: 3 93 3 8-3 9497 bp Feature: domain Description: DUF4379 Location: 39548-39707 bp Feature: domain Description: DUF43 79 Location: 3 9548-3 9707 bp Feature: domain Description: DUF4379 Location: 39758-39917 bp Feature: domain Description: DUF43 79 Location: 3 9758-3 9917 bp Feature: domain Description: DUF4379 Location: 39968-40127 bp Feature: domain Description: DUF43 79 Location: 3 9968-40127 bp Feature: domain Description: DUF4379 Location: 40178-40361 bp Feature: domain Description: DUF43 79 Location: 40178-403 61 bp Feature: gene Location: 40498-41100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40504-40621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40504-40621 bp Feature: domain Description: GIIM Note: maturase Location: 40675-40882 bp Feature: domain Description: GIIM Note: maturase Location: 40675-40882 bp Feature: gene Location: 41097-41798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41298-41775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41298-41775 bp Feature: gene Location: 41933-42097 bp Feature: gene Location: 42558-43427 bp Feature: domain Description: NLPC_P60 Location: 43173-43350 bp Feature: domain Description: NLPC_P60 Location: 43 173 -43 3 50 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tup_N (pfam08581), DUF4379 (pfam14311), RVT-GII, GIIM (pfam08388), NLPC_P60 (pfam00877)