myRT

myRT report for GCA_902385275.1_UHGG_MGYG-HGUT-02270

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Seq: CABMET010000028.1 (57008 bp)
Overview 1 RT 1: 62-2665 bp 2 RT 2: 10112-17688 bp 3 RT 3: 44055-47212 bp Neighborhood of RT #1 [62, 2685] RVT-GII HNHc FtsK Dcm Neighborhood of RT #2 [10112, 17717] Lysozyme_like Spr RVT-GII HNHc TpcC YibE_F Neighborhood of RT #3 [44055, 47247] DUF3173 Arm-DNA-bind_4 Phage_int_SAM_3 INT_ICEBs1_C_like RVT-GII KOG4768 Relaxase Feature: gene Location: 62-1015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71-203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 -203 bp Feature: domain Description: HNHc Note: nucleases Location: 743-902 bp Feature: domain Description: HNHc Note: nucleases Location: 743-902 bp Feature: gene Location: 1117-1497 bp Feature: domain Description: FtsK Location: 1132-1369 bp Feature: domain Description: FtsK Location: 1 1 32-1 369 bp Feature: gene Location: 1543-2685 bp Feature: domain Description: Dcm Location: 1546-2665 bp Feature: domain Description: Dcm Location: 1 546-2665 bp Feature: gene Location: 10112-12235 bp Feature: gene Location: 12232-13182 bp Feature: domain Description: Lysozyme_like Location: 12379-12841 bp Feature: domain Description: Lysozyme_like Location: 1 2379-1 2841 bp Feature: domain Description: Spr Location: 12868-13165 bp Feature: domain Description: Spr Location: 1 2868-1 31 65 bp Feature: gene Location: 13896-15725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14211-14910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 421 1 -1 491 0 bp Feature: domain Description: HNHc Note: nucleases Location: 15435-15600 bp Feature: domain Description: HNHc Note: nucleases Location: 1 5435-1 5600 bp Feature: gene Location: 15896-16813 bp Feature: domain Description: TpcC Location: 16133-16799 bp Feature: domain Description: TpcC Location: 1 61 33-1 6799 bp Feature: gene Location: 16962-17717 bp Feature: domain Description: YibE_F Location: 16974-17688 bp Feature: domain Description: YibE_F Location: 1 6974-1 7688 bp Feature: gene Location: 44055-44240 bp Feature: domain Description: DUF3173 Location: 44061-44232 bp Feature: domain Description: DUF31 73 Location: 44061 -44232 bp Feature: gene Location: 44245-45393 bp Feature: domain Description: Arm-DNA-bind_4 Location: 44290-44422 bp Feature: domain Description: Arm-DNA-bind_4 Location: 44290-44422 bp Feature: domain Description: Phage_int_SAM_3 Location: 44446-44614 bp Feature: domain Description: Phage_int_SAM_3 Location: 44446-4461 4 bp Feature: domain Description: INT_ICEBs1_C_like Location: 44812-45337 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 4481 2-45337 bp Feature: gene Location: 45750-46166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45837-46131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45837-461 31 bp Feature: gene Location: 46081-46353 bp Feature: domain Description: KOG4768 Location: 46105-46306 bp Feature: domain Description: KOG4768 Location: 461 05-46306 bp Feature: gene Location: 46885-47247 bp Feature: domain Description: Relaxase Location: 46915-47212 bp Feature: domain Description: Relaxase Location: 4691 5-4721 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), FtsK (COG1674), Dcm (COG0270), Lysozyme_like (pfam13702), Spr (COG0791), TpcC (pfam12642), YibE_F (pfam07907), DUF3173 (pfam11372), Arm-DNA-bind_4 (pfam14657)
Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), Relaxase (pfam03432)

Seq: CABMET010000044.1 (38026 bp)
Overview 1 RT 1: 32511-37983 bp Neighborhood of RT #1 [32511, 37991] RelB_DinJ FtsK_SpoIIIE RVT-GII Intron_maturas2 HNHc RVT-GII Feature: gene Location: 32511-32846 bp Feature: domain Description: RelB_DinJ Location: 32715-32838 bp Feature: domain Description: RelB_DinJ Location: 32 715-32 838 bp Feature: gene Location: 32908-33906 bp Feature: domain Description: FtsK_SpoIIIE Location: 33580-33826 bp Feature: domain Description: FtsK_SpoIIIE Location: 33580-3382 6 bp Feature: gene Location: 34512-36320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34776-35601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34776-35601 bp Feature: domain Description: Intron_maturas2 Location: 35673-35970 bp Feature: domain Description: Intron_maturas2 Location: 35673-35970 bp Feature: domain Description: HNHc Note: nucleases Location: 36147-36291 bp Feature: domain Description: HNHc Note: nucleases Location: 36147-362 91 bp Feature: gene Location: 37068-37991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37434-37983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37434-37983 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CABMET010000018.1 (85214 bp)
Overview 1 RT 1: 41013-45317 bp Neighborhood of RT #1 [41013, 45317] PRK09290 AlbA_2 RVT-AbiP2 DUF3841 Feature: gene Location: 41013-42287 bp Feature: domain Description: PRK09290 Location: 41031-42279 bp Feature: domain Description: PRK09290 Location: 4103 1-42279 bp Feature: gene Location: 42388-42702 bp Feature: domain Description: AlbA_2 Location: 42427-42598 bp Feature: domain Description: AlbA_2 Location: 42427-42598 bp Feature: gene Location: 42848-44344 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 43256-43712 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 43 256-43 712 bp Feature: gene Location: 44522-45001 bp Feature: domain Description: DUF3841 Location: 44531-44906 bp Feature: domain Description: DUF3 841 Location: 4453 1-44906 bp Feature: gene Location: 45168-45317 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09290 (allantoate amidohydrolase; Reviewed), AlbA_2 (pfam04326), RVT-AbiP2, DUF3841 (pfam12952)

Seq: CABMET010000106.1 (1871 bp)
Overview 1 RT 1: 78-1236 bp Neighborhood of RT #1 [78, 1322] RVT-GII GIIM Feature: gene Location: 78-1322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282-939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282-939 bp Feature: domain Description: GIIM Note: maturase Location: 1020-1236 bp Feature: domain Description: GIIM Note: maturase Location: 1020-1236 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CABMET010000111.1 (1396 bp)
Overview 1 RT 1: 335-1394 bp Neighborhood of RT #1 [335, 1394] RVT-GII Feature: gene Location: 335-1138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 656-1130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65 6-1130 bp Feature: gene Location: 1254-1394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CABMET010000092.1 (3950 bp)
Overview 1 RT 1: 445-3787 bp Neighborhood of RT #1 [445, 3906] DUF961 FtsK RVT-GII Feature: gene Location: 445-855 bp Feature: domain Description: DUF961 Location: 502-781 bp Feature: domain Description: DUF96 1 Location: 502-781 bp Feature: gene Location: 905-2122 bp Feature: domain Description: FtsK Location: 1550-2048 bp Feature: domain Description: FtsK Location: 1550-2048 bp Feature: gene Location: 2698-3906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2962-3787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 296 2-3787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF961 (pfam06125), FtsK (COG1674), RVT-GII

Seq: CABMET010000121.1 (727 bp)
Overview 1 RT 1: 59-713 bp Neighborhood of RT #1 [59, 724] RVT-GII Feature: gene Location: 59-724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329-713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329-7 13 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII