myRT

myRT report for GCA_902385535.1_UHGG_MGYG-HGUT-02298

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Seq: CABMGB010000031.1 (42052 bp)
Overview 1 RT 1: 34832-38397 bp Neighborhood of RT #1 [34832, 38397] RVT-DGRs Phage_XkdX Feature: gene Location: 34832-36088 bp Feature: gene Location: 36144-36296 bp Feature: gene Location: 36434-37795 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 36689-37328 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 36689-37328 bp Feature: gene Location: 37967-38182 bp Feature: domain Description: Phage_XkdX Location: 38030-38165 bp Feature: domain Description: Phage_XkdX Location: 38030-381 65 bp Feature: gene Location: 38182-38397 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_XkdX (pfam09693)

Seq: CABMGB010000081.1 (1907 bp)
Overview 1 RT 1: 2-1668 bp Neighborhood of RT #1 [2, 1838] RVT-GII GIIM Feature: gene Location: 2-211 bp Feature: gene Location: 552-1838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 765-1380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 765-1380 bp Feature: domain Description: GIIM Note: maturase Location: 1446-1668 bp Feature: domain Description: GIIM Note: maturase Location: 1446-1668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CABMGB010000033.1 (36343 bp)
Overview 1 RT 1: 28795-30788 bp Neighborhood of RT #1 [28795, 30788] reg_rSAM_mob group_II_RT_mat RVT-GII group_II_RT_mat Feature: gene Location: 28795-29232 bp Feature: domain Description: reg_rSAM_mob Location: 28807-29227 bp Feature: domain Description: reg_rSAM_mob Location: 28807-29227 bp Feature: gene Location: 29429-29746 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 29441-29654 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 29441-29654 bp Feature: gene Location: 29759-30172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29762-30083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29762-3 0083 bp Feature: gene Location: 30212-30490 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 30302-30488 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3 03 02-3 0488 bp Feature: gene Location: 30543-30788 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT reg_rSAM_mob (TIGR04472), group_II_RT_mat (TIGR04416), RVT-GII

Seq: CABMGB010000018.1 (83549 bp)
Overview 1 RT 1: 4309-9039 bp Neighborhood of RT #1 [4309, 9101] YodL LPD18 DUF4316 RVT-GII GIIM PBECR4 Feature: gene Location: 4309-5160 bp Feature: domain Description: YodL Location: 4324-4621 bp Feature: domain Description: YodL Location: 4 324 -4 621 bp Feature: domain Description: LPD18 Location: 4651-4891 bp Feature: domain Description: LPD18 Location: 4 651-4 891 bp Feature: domain Description: DUF4316 Location: 4945-5074 bp Feature: domain Description: DUF4 316 Location: 4 94 5-5074 bp Feature: gene Location: 5443-5643 bp Feature: gene Location: 5735-7024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6026-6659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6026-6659 bp Feature: domain Description: GIIM Note: maturase Location: 6740-6965 bp Feature: domain Description: GIIM Note: maturase Location: 674 0-6965 bp Feature: gene Location: 7213-8388 bp Feature: gene Location: 8481-9101 bp Feature: domain Description: PBECR4 Location: 8517-9039 bp Feature: domain Description: PBECR4 Location: 8517-9039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YodL (pfam14191), LPD18 (pfam18832), DUF4316 (pfam14195), RVT-GII, GIIM (pfam08388), PBECR4 (pfam18813)

Seq: CABMGB010000041.1 (26849 bp)
Overview 1 RT 1: 23958-26676 bp Neighborhood of RT #1 [23958, 26750] PTS-II-BC-nag InsQ OrfB_Zn_ribbon RVT-GII GIIM Feature: gene Location: 23958-24347 bp Feature: domain Description: PTS-II-BC-nag Location: 24006-24330 bp Feature: domain Description: PTS-II-BC-nag Location: 24006-24330 bp Feature: gene Location: 24306-24758 bp Feature: domain Description: InsQ Location: 24312-24429 bp Feature: domain Description: InsQ Location: 24312-24429 bp Feature: domain Description: OrfB_Zn_ribbon Location: 24525-24726 bp Feature: domain Description: OrfB_Zn_ribbon Location: 245 25 -24726 bp Feature: gene Location: 25452-26750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25707-26394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25 707-26394 bp Feature: domain Description: GIIM Note: maturase Location: 26475-26676 bp Feature: domain Description: GIIM Note: maturase Location: 26475 -26676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PTS-II-BC-nag (TIGR01998), InsQ (COG0675), OrfB_Zn_ribbon (pfam07282), RVT-GII, GIIM (pfam08388)

Seq: CABMGB010000015.1 (94814 bp)
Overview 1 RT 1: 67303-73026 bp 2 RT 2: 75258-81676 bp Neighborhood of RT #1 [67303, 73193] NA37 AAA-ATPase_like PDDEXK_9 RVT-GII GIIM HicB Neighborhood of RT #2 [75258, 81676] RVT-UG24 RVT-UG24 Feature: gene Location: 67303-68358 bp Feature: domain Description: NA37 Location: 67615-68227 bp Feature: domain Description: NA37 Location: 6 76 15-6 8227 bp Feature: gene Location: 68583-70226 bp Feature: domain Description: AAA-ATPase_like Location: 68694-69474 bp Feature: domain Description: AAA-ATPase_like Location: 6 86 94-6 9474 bp Feature: domain Description: PDDEXK_9 Location: 69945-70176 bp Feature: domain Description: PDDEXK_9 Location: 6 9945-70176 bp Feature: gene Location: 70353-71747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70671-71295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 706 71-71295 bp Feature: domain Description: GIIM Note: maturase Location: 71352-71577 bp Feature: domain Description: GIIM Note: maturase Location: 71352-71577 bp Feature: gene Location: 72247-72681 bp Feature: gene Location: 72693-73193 bp Feature: domain Description: HicB Location: 72705-73026 bp Feature: domain Description: HicB Location: 72705-73026 bp Feature: gene Location: 75258-75596 bp Feature: gene Location: 75673-76386 bp Feature: gene Location: 76784-80098 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 77132-77381 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 77132-77381 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 77447-77675 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 77447-776 75 bp Feature: gene Location: 80275-80826 bp Feature: gene Location: 80819-81676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NA37 (pfam04245), AAA-ATPase_like (pfam09820), PDDEXK_9 (pfam08011), RVT-GII, GIIM (pfam08388), HicB (pfam05534), RVT-UG24