myRT

myRT report for GCA_902385885.1_UHGG_MGYG-HGUT-02327

Download annotations/find similar RTs

Seq: CABMGY010000152.1 (77118 bp)
Overview 1 RT 1: 37098-45692 bp Neighborhood of RT #1 [37098, 45700] NosD_copper_fam NosD_copper_fam SLH SLH Phage_int_SAM_1 INT_C_like_2 RVT-Retrons IscR Feature: gene Location: 37098-42038 bp Feature: domain Description: NosD_copper_fam Location: 39957-40245 bp Feature: domain Description: NosD_copper_fam Location: 39957-40245 bp Feature: domain Description: NosD_copper_fam Location: 40602-40875 bp Feature: domain Description: NosD_copper_fam Location: 40602-40875 bp Feature: domain Description: SLH Location: 41553-41673 bp Feature: domain Description: SLH Location: 41 553-41 673 bp Feature: domain Description: SLH Location: 41874-42003 bp Feature: domain Description: SLH Location: 41 874-42003 bp Feature: gene Location: 42654-43499 bp Feature: domain Description: Phage_int_SAM_1 Location: 42690-42912 bp Feature: domain Description: Phage_int_SAM_1 Location: 42690-4291 2 bp Feature: domain Description: INT_C_like_2 Location: 42987-43479 bp Feature: domain Description: INT_C_like_2 Location: 42987-43479 bp Feature: gene Location: 43638-44600 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43752-44304 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43752-44304 bp Feature: gene Location: 44641-45213 bp Feature: gene Location: 45296-45700 bp Feature: domain Description: IscR Location: 45299-45692 bp Feature: domain Description: IscR Location: 45299-45692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NosD_copper_fam (TIGR04247), SLH (pfam00395), Phage_int_SAM_1 (pfam02899), INT_C_like_2 (cd01191), RVT-Retrons, IscR (TIGR02010)

Seq: CABMGY010000006.1 (31390 bp)
Overview 1 RT 1: 14810-23257 bp Neighborhood of RT #1 [14810, 23298] SbcD ABC_sbcCD RVT-UG17 SLATT_5 YbbA Feature: gene Location: 14810-15988 bp Feature: domain Description: SbcD Location: 14849-15758 bp Feature: domain Description: SbcD Location: 14849-15758 bp Feature: gene Location: 15985-19278 bp Feature: domain Description: ABC_sbcCD Location: 15988-19261 bp Feature: domain Description: ABC_sbcCD Location: 15988-192 61 bp Feature: gene Location: 19607-21103 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 19865-20477 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 19865-2 0477 bp Feature: gene Location: 21121-21747 bp Feature: domain Description: SLATT_5 Location: 21148-21730 bp Feature: domain Description: SLATT_5 Location: 2 1148-2 1730 bp Feature: gene Location: 22612-23298 bp Feature: domain Description: YbbA Location: 22777-23257 bp Feature: domain Description: YbbA Location: 2 2 777-2 32 57 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcD (COG0420), ABC_sbcCD (cd03279), RVT-UG17, SLATT_5 (pfam18160), YbbA (COG4181)

Seq: CABMGY010000238.1 (39468 bp)
Overview 1 RT 1: 3991-9223 bp Neighborhood of RT #1 [3991, 9223] ChiA1_BD ChiA1_BD RVT-DGRs Avd_like Feature: gene Location: 3991-4767 bp Feature: domain Description: ChiA1_BD Location: 4273-4342 bp Feature: domain Description: ChiA1_BD Location: 4273 -43 42 bp Feature: domain Description: ChiA1_BD Location: 4633-4735 bp Feature: domain Description: ChiA1_BD Location: 463 3 -473 5 bp Feature: gene Location: 4780-6477 bp Feature: gene Location: 6419-7525 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6620-7226 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6620-7226 bp Feature: gene Location: 7855-8274 bp Feature: domain Description: Avd_like Location: 7900-8224 bp Feature: domain Description: Avd_like Location: 7900-8224 bp Feature: gene Location: 8495-9223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ChiA1_BD (cd12214), RVT-DGRs, Avd_like (cd16376)

Seq: CABMGY010000215.1 (33537 bp)
Overview 1 RT 1: 7493-12476 bp Neighborhood of RT #1 [7493, 12476] ChiA1_BD ChiA1_BD RVT-DGRs Avd_like Feature: gene Location: 7493-7966 bp Feature: domain Description: ChiA1_BD Location: 7670-7799 bp Feature: domain Description: ChiA1_BD Location: 7670-7799 bp Feature: domain Description: ChiA1_BD Location: 7856-7934 bp Feature: domain Description: ChiA1_BD Location: 7856-7934 bp Feature: gene Location: 7985-9691 bp Feature: gene Location: 9480-10754 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9696-10299 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9696-10299 bp Feature: gene Location: 11058-11513 bp Feature: domain Description: Avd_like Location: 11133-11457 bp Feature: domain Description: Avd_like Location: 11133-114 57 bp Feature: gene Location: 11730-12476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ChiA1_BD (cd12214), RVT-DGRs, Avd_like (cd16376)

Seq: CABMGY010000163.1 (96145 bp)
Overview 1 RT 1: 92305-95801 bp Neighborhood of RT #1 [92305, 95801] Maff2 TraG-D_C RVT-GII HNHc Feature: gene Location: 92305-92445 bp Feature: domain Description: Maff2 Location: 92308-92434 bp Feature: domain Description: Maff2 Location: 92308-92434 bp Feature: gene Location: 92510-93001 bp Feature: domain Description: TraG-D_C Location: 92513-92777 bp Feature: domain Description: TraG-D_C Location: 925 13-92777 bp Feature: gene Location: 93205-95082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93520-94252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 935 20-9425 2 bp Feature: domain Description: HNHc Note: nucleases Location: 94828-94972 bp Feature: domain Description: HNHc Note: nucleases Location: 94828-94972 bp Feature: gene Location: 95173-95604 bp Feature: gene Location: 95664-95801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Maff2 (pfam12750), TraG-D_C (pfam12696), RVT-GII, HNHc (smart00507)